Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03072 aTGGGAGCTAGTATTTCCACCAATGATGATCATGAGGGATATCTTTCTTATTCAAAGACTTGTCTTGATGATATTCCAGAAAGTTGCATCTCTTCCATGATGATGAGGTTGGATCCTCAAGAGATTTGTAAATTGGCTAGAGTTAACAAAACTTTTCATAGAGCTTCCTCTGATGATTATGTTTGGGAATCTAAGTTGCCACAAAGTTATAAGTTTCTTGTCAACAAAATTCTTGGTGAAGGAAAACTTTGTTCTATGACTAAGAAAGAGATCTATGCTAAACTATGTCAACCCAATTTCTTTGATGGTGGTACAAAAGAAGTTTGGCTTGATAGATCCAGTGGACAAGTTTGTTTGTTCATTTCAtcaaaatctttcaagataaCTGGAATAGATGATAGAAGATATTGGAACTATATTTCCACTGAGGAATCAAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTATTAGGGGAGCTAGAGTTTGAGTTTCCAAAAGGCAACTATAGCATATTTTTCAAGCTTCAATTGGGGAAGACCTCAAAGAGATTAGGCAGAAGAGTGTGCAATCTTGAACAAGTACATGGTTGGGACATCAAGCCAGTTAGATTCCAACTTTCTACATCTGACGGTCAGAATTCACTCTCTCAATGTTATATGAATGGGCCTGGAGAATGGGCCTACTACCATGTTGGAGATTTTGCCAGTGAAAAGGCTAATGGACCCATAAACATTAAGTTTTCTTTGGCCCAAATAGATTGCACACACACCAAAGGTGGTCTTTGCATAGATGGGGCAGTGATTTGTCCAAAGGAGTTAGCATATAAGTTGAAACAATTTTAG 858 0.3683 MGASISTNDDHEGYLSYSKTCLDDIPESCISSMMMRLDPQEICKLARVNKTFHRASSDDYVWESKLPQSYKFLVNKILGEGKLCSMTKKEIYAKLCQPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNYISTEESRFKSVAYLQQMWWVEVLGELEFEFPKGNYSIFFKLQLGKTSKRLGRRVCNLEQVHGWDIKPVRFQLSTSDGQNSLSQCYMNGPGEWAYYHVGDFASEKANGPINIKFSLAQIDCTHTKGGLCIDGAVICPKELAYKLKQF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03072 285 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Tsu06g03072 285 Gene3D - 15 160 - -
Tsu06g03072 285 Pfam Phloem protein 2 117 275 IPR025886 -
Tsu06g03072 285 PANTHER F-BOX PROTEIN 1 285 - -
Tsu06g03072 285 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
Tsu06g03072 285 SUPERFAMILY F-box domain 19 118 IPR036047 GO:0005515
Tsu06g03072 285 SMART fbox_2 25 65 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03072 Tsu-Chr6 40453455 40456469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03072 - - gmx:100787859 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03072 06 40453455 40456469 Tsu01g04466 01 52340184 52343381 PCT