Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02973 ATGAAGAGTGTAGTGTTGAACGTTGATATTCATAATGATAAAATCAAGCAAAAAGTTATGAAGACAGTATCTAGCCTTTCAGGGATTGAATCAGTATCAATAGACACAAAAGAGAAGAAATTGACATTAACAGGATACATTGATCCAGTAAAGGCAGTTTCCAAGCTACGAAAGTTTTGTCATACTGAAGTAGTTTCAGTTGGACCTTCAAAACCAAAAGAGGAGAAAAAGTCAGAGGATATACTCTTAACCTATCCATTCTATTATCATGTGCAACCAACACAATATATTCAAGATTTCTACTATGTTTGA 312 0.3333 MKSVVLNVDIHNDKIKQKVMKTVSSLSGIESVSIDTKEKKLTLTGYIDPVKAVSKLRKFCHTEVVSVGPSKPKEEKKSEDILLTYPFYYHVQPTQYIQDFYYV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02973 103 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 80 - -
Tsu06g02973 103 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Tsu06g02973 103 Gene3D - 1 72 - -
Tsu06g02973 103 Pfam Heavy-metal-associated domain 6 57 IPR006121 GO:0046872
Tsu06g02973 103 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02973 Tsu-Chr6 39092890 39093728 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02973 - - mtr:MTR_3g434890 119.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02973 06 39092890 39093728 Tsu06g02973 06 39092890 39093728 ECH
Tsu06g02973 06 39092890 39093728 Tsu01g04370 01 51561119 51562512 PCT