Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04370 ATGAATAAAATAGTGTTGCAAGTGGAAATACACAAtgacaaaacaaagaaaaaatccatgAAAGCAATCTCGAATATTTCAGGGGTTGAGTCAGTATCATTGGATATAAAGGACCAGAAATTAACCTTAACTGGAGACATAGATCCTGTGGATGTAGTGGCAAAGTTAAGGAAGCTATGTCATCCTAAGATATTGTCTGTTGGACCAGCAAAAGAGCctaagaaagaagagaaaaagaaaccaaCAGAAGAGAAAAAGGATCAAAATAATAAGAATTCAGGAGATGGTGTTGTGAAGATTTGTGAAGCCTATCATTATCCTATAATGATGAAACAACCACATTACTACTACACTAGTGTGGAAGAGAATCCTAGTTCATGTGTCATATGCTAA 393 0.313 MNKIVLQVEIHNDKTKKKSMKAISNISGVESVSLDIKDQKLTLTGDIDPVDVVAKLRKLCHPKILSVGPAKEPKKEEKKKPTEEKKDQNNKNSGDGVVKICEAYHYPIMMKQPHYYYTSVEENPSSCVIC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04370 130 SUPERFAMILY HMA, heavy metal-associated domain 4 61 IPR036163 GO:0046872
Tsu01g04370 130 Gene3D - 1 72 - -
Tsu01g04370 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 130 - -
Tsu01g04370 130 MobiDBLite consensus disorder prediction 68 92 - -
Tsu01g04370 130 Pfam Heavy-metal-associated domain 14 58 IPR006121 GO:0046872
Tsu01g04370 130 MobiDBLite consensus disorder prediction 67 95 - -
Tsu01g04370 130 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 130 - -
Tsu01g04370 130 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04370 Tsu-Chr1 51561119 51562512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04370 - - cam:101510144 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04370 01 51561119 51562512 Tsu01g04370 01 51561119 51562512 ECH
Tsu06g02973 06 39092890 39093728 Tsu01g04370 01 51561119 51562512 PCT
Tsu01g04370 01 51561119 51562512 Tsu06g02974 06 39096174 39097221 PCT