Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02780 ATGGCTGCCAAACGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGGCCTGACGCTAAGTCATTGCTTTTCAGTTTGTTGCTGGTCATAGCTCCAGTTGTCATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTCAATATTTATgTGCTGATACTTCTCTTTCTTACTTCTGCACGTGATCCGGGCATTATACCAAGGAATTTACATCCACCAGAAGAAGAGTTCCGTTATGACTCGTCCGTTTCAATTGATATTGGGGGACGTCAAACACCGAGCCTTCAGTTCCCTCGAACAAAGGAAGTAATGGTTAATGGTCATCCTGTAAGAGTGAAGTATTGTGATACCTGTATGTTGTATCGTCCTCCTCGTTGCTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGTATTGGACTGAGGAACTACCGTTACTTCTTTATGTTTGTTTCTTCGGCAACTCTTCTATGCATCTATGTGTTTTCGTTCTCAGCTTATTACATCAAGGTTCTGATGGATGATAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTGTCCTAATGGCATATTGTTTCATTTCTTTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAACCAGACCACCTATGAAAACTTTCGATACAGAGCAGATAACAGAACGAATGTTTACCATCGGGGGtgtttaaataattttctgGAAGTATTTTGCACAGAAGTGAAGCCTTCAAGGAACAATTTTCGGGCTCTTGTTCAAGAAGAGGAGGTACAGAGGCCACCTCCTCGGGTCGTTACCCGGGAACCAGAACAAGAATTGGGAGGAGATCCTCGATCTAAGGTTGAAGATGATTTAGACATAGGTGAAGACCTATTAAAAATATCACAGCGCCGGAATATTGATGAAATTGATGAAGATATTCGGAGCAGAGGGAGCAATGGACCTTACAATAATGCATCCGAAGGTGATTCAGTTTTGGGGTCAGACCGTCGAGCTCCAACAGTTCGATCAGAAGAAAGGCCCTCAAGTTGGAGAAGAAGTGGAAGCTGGGAAATTGCGCCAGATGTACTTGCCAATTCTAATGTAACTGAAACTAGAAGCTATGTTTCTGCGCGTCAATGA 1266 0.4186 MAAKRVYEAWKGSNKFLFGGRLIFGPDAKSLLFSLLLVIAPVVIFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSARDPGIIPRNLHPPEEEFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGHPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSFSAYYIKVLMDDNHGTVWKAMKESPASVVLMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRTNVYHRGCLNNFLEVFCTEVKPSRNNFRALVQEEEVQRPPPRVVTREPEQELGGDPRSKVEDDLDIGEDLLKISQRRNIDEIDEDIRSRGSNGPYNNASEGDSVLGSDRRAPTVRSEERPSSWRRSGSWEIAPDVLANSNVTETRSYVSARQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02780 421 MobiDBLite consensus disorder prediction 300 334 - -
Tsu06g02780 421 ProSiteProfiles DHHC domain profile. 139 189 - -
Tsu06g02780 421 MobiDBLite consensus disorder prediction 351 397 - -
Tsu06g02780 421 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
Tsu06g02780 421 MobiDBLite consensus disorder prediction 308 334 - -
Tsu06g02780 421 PANTHER S-ACYLTRANSFERASE 6 421 - -
Tsu06g02780 421 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02780 Tsu-Chr6 36282797 36290937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02780 65 309 Lipid Metabolism Gene Families AT4G22750 27.969 1.04e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02780 K16675 - gmx:100818705 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02780 06 36282797 36290937 Tsu01g04284 01 50610142 50614235 PCT