Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04284 ATGGCAGCAAAGCGCGTGTATCAAGTTTGGAAAGGAAGTAATAAATTCATATTTGGAGGGAGGTTGATATTTGGGCCTGATGCTAGGTCCGTGCTTATCACTTTGTCGCTGATTATTGTTCCAGTTATAATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCCTATTATTCAGGATATGCTATTTTAGTAGTGGCAATTCTCTTTACTATCCATGTCCTGGTGCTTCTTTGTCTTACTTCTGCACGTGATCCGGGTGTCATTCCGAGGAATTCACATCCACCAGAAGAAGAGTTTCGTTATGAGTCTTCTGGGGTAGGAGGACAACAAACGCCAAGCCTTCAGTTCCCACGAACAAAAGAAGTAATGGTCAATGGTCTTTCTGTAAAGGTGAAATATTGTGAAACTTGTATGCTGTATCGCCCTCCTCGTTGCTCGCATTGCTCCATATGCAACAACTGTGTTGAACGTTTCGATCACCATTGCCCTTGGGTGGGCCAATGCATCGGACTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCCGCAACTATTCTGTGCATCTATGTGTTTTCCTTCTCGGCATTTTACATAAAGGTTCTGATGGATAATAATGATATTGGCACAGTGTGGAAGGCAATAAAAGAATCCCCTGCATCTGTGGTTTTAATGGCTTATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTAACTGGTTTTCATATGTACCTTATCGGCTCAAACCAGACTACCTACGAAAACTTCCGTTATAGAGCTGATGGCAGGATCAATGTTTTTAATCAAGGCtgtttaaataattttctgGAAATGTTTTGCACAGAAATAAGACCCTCGAGGAACAATTTCAGGGCTTTTGTTCAAGAGGAGATACAAAGGCCGCTGACTACGGTCGTTGTCCGGGGACGTGAACCAGATGATTTAGGTGGAGATCGTCGTCCTAAGGTTGAAGATGATCTCGATATCGGTGAAGATTTATTGAAGATTTCACAGCGTAGGAATGTTGAAGAACTTGGCGAAGATATTCAAAGTAGAGGGAGCAATGGTGCGCCCTATAATACAGCTGAACCTGATTCAATTTTGTCGTCAGATCATCGAGCTACCACAATACGATCTGATGCTAGGCACTCAAGTTGGGAAAGGAGTGGAAATTGGGAAATTGCACAAGATGTGTTTGCCAATTCAAACGTCACCGAAAGCAGAAACTATGTCACATCAAAGGAAATACGCCAATGA 1269 0.4177 MAAKRVYQVWKGSNKFIFGGRLIFGPDARSVLITLSLIIVPVIIFCVFVARHLRHEFSSYYSGYAILVVAILFTIHVLVLLCLTSARDPGVIPRNSHPPEEEFRYESSGVGGQQTPSLQFPRTKEVMVNGLSVKVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSFSAFYIKVLMDNNDIGTVWKAIKESPASVVLMAYCFISLWFVGGLTGFHMYLIGSNQTTYENFRYRADGRINVFNQGCLNNFLEMFCTEIRPSRNNFRAFVQEEIQRPLTTVVVRGREPDDLGGDRRPKVEDDLDIGEDLLKISQRRNVEELGEDIQSRGSNGAPYNTAEPDSILSSDHRATTIRSDARHSSWERSGNWEIAQDVFANSNVTESRNYVTSKEIRQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04284 422 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
Tsu01g04284 422 ProSiteProfiles DHHC domain profile. 136 186 - -
Tsu01g04284 422 PANTHER S-ACYLTRANSFERASE 6 421 - -
Tsu01g04284 422 MobiDBLite consensus disorder prediction 357 378 - -
Tsu01g04284 422 MobiDBLite consensus disorder prediction 349 390 - -
Tsu01g04284 422 MobiDBLite consensus disorder prediction 93 115 - -
Tsu01g04284 422 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04284 Tsu-Chr1 50610142 50614235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04284 65 286 Lipid Metabolism Gene Families AT4G22750 28.216 1.21e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04284 K16675 - gmx:100805189 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04284 01 50610142 50614235 Tsu01g04284 01 50610142 50614235 ECH
Tsu06g02780 06 36282797 36290937 Tsu01g04284 01 50610142 50614235 PCT