Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02699 ATGAACGGAAATTTTCAGAACAATTACAGTGGTGGTTGGAATGATGTGCCATTCAATGGTTTCAGTCAGGAACAGTTTGACTACAATTACCAACAAATGCCGACACAATATAATGATAACAATTACTTACCTCATCAAACAGCGATGCAATATGCTGATAACATGAAGTTACCACATCAAACACCAGCACACTATGTTGATAACAAGCAGTTACCACCTCCAATGCCGACACAATATATTGATAACAGGCAGTTACCACCTCCAATGCCGACGCAATATGTTGATAACAGGCAAATGCCACATCAGACGCCCATGCAAAATGTTGATAACAGACAGTTACCACATCAGATGCCGATCCAAAATTTTGATAACAGCCAGTTACTACATCAAATGCAACATCAGACGCCAATGCAAAATGTTGATAACAAACAGCTACCACATCAGATGGCAATGCAAAATTTTGATAACAGCCACTTACCACATCATATGCCGATGCAAAATTTTGATAACAGACAGTTGCTAAATCAGATGCCGGCACAGATGCAATATGTTGAGAACAGACAGTTGTCACCTCAGACGCCGATGCAAAATGTTGATAATAGGCAGTTACCACATCATATACCGATGCAAAATTTTGATAACAGACAGTTACTACATCAGACGCCGGCGCAaatgcaatatgttgataacaGGCAGTTATCACCTCATATGCCGGCACAATATGTTGATAACAGTCAGTTACCACATCCGACGCCGACACTATCTGTTGATAAGAGCCAGTTACCACATCAGGCACCAACACAAACACAATATGTTGATAATAGCCAGTTAGCACATCAGATGCCGACACAATATGTTGATAACAGGAAGTTACCACATCAGACGCCGCCGCAATATGTTGATAACAGACAGATACTACATCAGACGCAACTTGTTGATAATAGGCAGTTACCACATCAAATGCTGGCACAACATGTAGATAACCGGGCGTTACCACCAAATCAAATGCCAGAGCAACATGTCGATAACAGGCAGGTTCCACATCAAGTGTCGGTGCAACTTGTTGATAATAGGCAGTTACCACATCAAATGCCGGTGCAACATGTTAATAACAGGACGTTACCATCACATCAAATGCCGGAGAAACATCTTCCACATCAAATGCCGGCGCAACACGTTGATAACAGGCAGTTACTGCATCAAATGCCGGCACACTTTGCTGTTAACGGAGACTTACCACAACAAACACCTGAAGACCGTGCTGATAAGAAGTGCTTACCTTCATTTATACACTGTGATATTTGTAATATTACGATGATTCCCGAGTGTTTGAAAGAGCATGATAATGGAAAGAAACATCAAAGATTGTTATTAGAACTACGTCAAATGCAGGAAGGCTATGCTGATAAAAAGTGCTTACCTCAACAAATGCCAAAAGTCACTGCTGATAAAAGGCCCTTACCACATGAAAAGCCGGACTATGATGATGAATTGTGCTTAACCCCACTACCACCACTTGCACGCTGTGAAATTTGTAATATTACAATGATTCCCAAGTCTTTGGAACAACATTATAATGGAAAGAGACATAAAAAAGTGTTATTAGAACTGCGCAAGCAGTCAGCAAAACATAAAACTTCAAATGGAGAAGAGAGTAGACATATTCGAGATTCTCAAGTTAATCCAGTAGTTCCACCTAAGAAAGttccaaaatttaaaaaagtttgGCGCCCAGTTGAAAATATGAATCATGAAGCTCAGGGATCACACTGGTACAAAGATGCTAAAAGGAAACACATGAATCACATCCATGCAATGGGTTTCAAGAACAAGAAATCTAAAAGGAAAGTCAGGGATAACACAAATGCAAAGAATGGTGGTTTCAAGCGCAAGATTGGAGGACCAACAGGAAGTAAGTACATGAAGATGAATAATGGGAAAAGAAGGCGCGTGAAGTCATCAAACCCTGAGGTCAATGCTCTGTCAAATTCAGTCGAATCTCTAGTCCAATTACCTGAATTAACACCATCATCAGGATGTGTTGCTTCTCCTAAAACGGCACCAATTCCCGCTCAAGAATCGAGTTTTGAGCTACAGTCTCAACATGTCTCAGCTCCACTGTCTCAAGAGTCCAAAGGCAAAGAATATCACAAGTTTCAAAATACTGTGGAAAAGATTGATCAGCCACAATCAACTCCGGTTGAGTTGAATGCCTCAACAGGGTATAAGACCGAATTTCTGAGTAGTGATTTTGCTGCAATAGCACCACCACAAGTCCCTGCAACTTCTCAGGTGTTCACACCACCAGCAGCGGTGGAATCAAGTTTTGAACCCAAAAATCATATTGATTCGCAGAGAGAAGTAACAGAAGCCAAAGAACATCATGAGATTCAGAATCATGCTTTGGAAAGAAATGATCAGCCGGACTCAATCTCAATGGAGTTTCATGCCCCTACAGGTTCTGATATTAATACCTTGATCGAAGATTCATGTTCTGATTATGGTGCCATAGTAATAGCAACACCACAGTCTCCTATTGCTTCTCACGTATCCACACCAGTAGCAGTTATTGATTCAGAATTGTCAGAAAGCAAAGTTCATAATGAGATTCAGAATCATATTGTTGATTCAAATGATCAGCAGCATTTAGTCTCAATGGAGTTGCAAGATCCTGCTGGTTCTATAACTAACAACCAAACTGAAGTTTTGAATTCTGATTCTACCGCGATTGAAGTAGTTATAGAACCACTTGCATCCGCACCGCCAGATGCATCACTTTCATGTTTTGAAGCCCTAACTGAACATGGTCTACCTACTGAAATTGAACCTGAAGTATCGGAATCCGTAGCATATTTTGACAGCCAGCATCCTACCGAGGAAACTAATATTGAACTGCTACCATCAGTCTCAATGGAGATTGATGCTCTTTCAGAGGTCAGTGCTGAAACTGAAACTGAAGACGGAAATTCTCAAGTGGAAGTAGAGATGGATGTTGTCGCCACTGAGTCAGAGATATCTAAGTTGCCCCAGGTAACTGTTTGTCTTACATGTGGTGATGAAGGCTTTGAAGAGGCAATAGTATATTGCAACAAATGTGAAGATTGTTTCATGCATAGGTATTGTTTAGATGGACCTGTGATTTTTACAGACGAGGTTATTTGGTTTTGTGAGGATTGTGAACAAGAGGTAGTAGACGCGGATTATCCTGATGATGATGCTACAGATTCAGAAAAATGCGACATTGATTCTATTGCGGACTGTGTGACTGTTATTGATCCACAGCCTATTGCCGATCCAATCTGGAGGGGAAGTTTACAGGTTTTCCACAAAAGCAATGATAAAATCCCTAGTCTAGTGGGTCATTTGTCGACATTAGCATGCCCTAAAGTTCAAGAGGAGACGAAACATCTCCCTTACGTGCTTAATGCAGACTTGCTTCCAAGATCAGCTGTGTGGCCCACAAGTTTCGCGAAATTTGGAACAAATAACCAGAGCATTGGCCTTTATTTCTTTCCTCCGAATGAAAGGTTTGAGAGATATTATGACCAACTAGTTGATGAAATGATTTCCAAAGACCTTGCCATAAGAGCTAGGGTTGAAAAAGCTGAACTGTTAATTTTTGCTTCTACAATGCTTCCAAGCCAATATAAGAGATTTCAATCAAAGTATTACTTATGGggaatttttaaaagaaaacaaacagcAAGTACCATCAAAGATTCATGA 3726 0.4002 MNGNFQNNYSGGWNDVPFNGFSQEQFDYNYQQMPTQYNDNNYLPHQTAMQYADNMKLPHQTPAHYVDNKQLPPPMPTQYIDNRQLPPPMPTQYVDNRQMPHQTPMQNVDNRQLPHQMPIQNFDNSQLLHQMQHQTPMQNVDNKQLPHQMAMQNFDNSHLPHHMPMQNFDNRQLLNQMPAQMQYVENRQLSPQTPMQNVDNRQLPHHIPMQNFDNRQLLHQTPAQMQYVDNRQLSPHMPAQYVDNSQLPHPTPTLSVDKSQLPHQAPTQTQYVDNSQLAHQMPTQYVDNRKLPHQTPPQYVDNRQILHQTQLVDNRQLPHQMLAQHVDNRALPPNQMPEQHVDNRQVPHQVSVQLVDNRQLPHQMPVQHVNNRTLPSHQMPEKHLPHQMPAQHVDNRQLLHQMPAHFAVNGDLPQQTPEDRADKKCLPSFIHCDICNITMIPECLKEHDNGKKHQRLLLELRQMQEGYADKKCLPQQMPKVTADKRPLPHEKPDYDDELCLTPLPPLARCEICNITMIPKSLEQHYNGKRHKKVLLELRKQSAKHKTSNGEESRHIRDSQVNPVVPPKKVPKFKKVWRPVENMNHEAQGSHWYKDAKRKHMNHIHAMGFKNKKSKRKVRDNTNAKNGGFKRKIGGPTGSKYMKMNNGKRRRVKSSNPEVNALSNSVESLVQLPELTPSSGCVASPKTAPIPAQESSFELQSQHVSAPLSQESKGKEYHKFQNTVEKIDQPQSTPVELNASTGYKTEFLSSDFAAIAPPQVPATSQVFTPPAAVESSFEPKNHIDSQREVTEAKEHHEIQNHALERNDQPDSISMEFHAPTGSDINTLIEDSCSDYGAIVIATPQSPIASHVSTPVAVIDSELSESKVHNEIQNHIVDSNDQQHLVSMELQDPAGSITNNQTEVLNSDSTAIEVVIEPLASAPPDASLSCFEALTEHGLPTEIEPEVSESVAYFDSQHPTEETNIELLPSVSMEIDALSEVSAETETEDGNSQVEVEMDVVATESEISKLPQVTVCLTCGDEGFEEAIVYCNKCEDCFMHRYCLDGPVIFTDEVIWFCEDCEQEVVDADYPDDDATDSEKCDIDSIADCVTVIDPQPIADPIWRGSLQVFHKSNDKIPSLVGHLSTLACPKVQEETKHLPYVLNADLLPRSAVWPTSFAKFGTNNQSIGLYFFPPNERFERYYDQLVDEMISKDLAIRARVEKAELLIFASTMLPSQYKRFQSKYYLWGIFKRKQTASTIKDS 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02699 1241 MobiDBLite consensus disorder prediction 540 557 - -
Tsu06g02699 1241 PANTHER - 1093 1238 - -
Tsu06g02699 1241 SUPERFAMILY beta-beta-alpha zinc fingers 503 535 IPR036236 -
Tsu06g02699 1241 MobiDBLite consensus disorder prediction 540 566 - -
Tsu06g02699 1241 PANTHER OS12G0161900 PROTEIN 1010 1079 - -
Tsu06g02699 1241 SUPERFAMILY FYVE/PHD zinc finger 1009 1062 IPR011011 -
Tsu06g02699 1241 MobiDBLite consensus disorder prediction 610 658 - -
Tsu06g02699 1241 PANTHER - 1010 1079 - -
Tsu06g02699 1241 SMART ZnF_U1_5 504 537 IPR003604 GO:0003676|GO:0008270
Tsu06g02699 1241 SMART ZnF_U1_5 427 460 IPR003604 GO:0003676|GO:0008270
Tsu06g02699 1241 Gene3D Classic Zinc Finger 503 544 - -
Tsu06g02699 1241 PANTHER OS12G0161900 PROTEIN 1093 1238 - -
Tsu06g02699 1241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 974 1066 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02699 Tsu-Chr6 34792154 34800052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02699 - - cam:101510687 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02699 06 34792154 34800052 Tsu01g04342 01 51377684 51380566 PCT