Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01302 ATGTCCATAAAAGAATGCGGCCACCACGACGACGATGACCGCCGCACCCTCCTCCGCCGCATAATCGCCGCCACTGCCTTCATTTTCCTAATCCTCCTAACCATTTTTCTAATATGGATCATCCTTAGACCAACAAAACCACATTTCATAATCCAAGATGCAACAATTTACACTTTCAACATCTCATCACCAAATTCTTCACCATTTCCCATTCCCAACACACTAACCCTCACAATGCAAATCACACTCTCAACTCATAACCCAAACAAAAGAATAGGAATTTACTATCAAAAACTTCACGTGTATGGTTCTTATAAAAACCAACAAATCTCACTACCAACTTCACTTCCTGATACTTACCAAGGTCATAAAGATTTTACCATTTGGTCGCCGTTTATTTACGGCGTTGGTGTTCCGATTGCGCCTTTTACACTTAGCTCAATGCAACAGGATCAGAATAACGGAATGGTTTTGgttaacatcaaaattaacggaaGAGTTAAGTGGAAGGTGGGGACTTGGATCTCTGGGAGGTACCATCTTTTTGTTAATTGTCCTGCTTATGTTCGGTTCGGCGGTGATCGGAATAATGGTGCCGGAGTTGTTGCTCCGGCAGTTAAGTTTCAGCTTTTGCAAAAATGTAAAGTtgatgtttag 657 0.4018 MSIKECGHHDDDDRRTLLRRIIAATAFIFLILLTIFLIWIILRPTKPHFIIQDATIYTFNISSPNSSPFPIPNTLTLTMQITLSTHNPNKRIGIYYQKLHVYGSYKNQQISLPTSLPDTYQGHKDFTIWSPFIYGVGVPIAPFTLSSMQQDQNNGMVLVNIKINGRVKWKVGTWISGRYHLFVNCPAYVRFGGDRNNGAGVVAPAVKFQLLQKCKVDV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01302 218 PANTHER OS05G0367900 PROTEIN 9 218 IPR044839 GO:0098542
Tsu06g01302 218 Pfam Late embryogenesis abundant protein 83 185 IPR004864 -
Tsu06g01302 218 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01302 Tsu-Chr6 12272855 12273852 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01302 - - gmx:100812905 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01302 06 12272855 12273852 Tsu06g01302 06 12272855 12273852 ECH
Tsu02g04750 02 56649001 56649874 Tsu06g01302 06 12272855 12273852 PCT