Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04750 ATGACAAAAAATTGTGACTACCATGAAGACGAACACCGCCAACTCATCCGGCGCATATTTGCCGGAATCCTTAGCTTCATTGTTCTCATACTCCTTGTAATCTTCTTAGTTTGGATCATCCTCCGACCAACCAAACCCCGGTTCATCCTCCAAGATGCAACCGTTTTCGCCTTCAACCTCTCCTCCACGGGCGAAACACCTTCTTCCACTATGCCTACACCCAACACACTAACCCTCACAATTCAAGTCACTCTTTCATCCTTCAATCCAAACTCGAAAATTGGCATTTACTATCACAAACTTGACGCATACGCTTCCTATAGAGGACAACAAATCTCTTTAGCCACTGAACTTCCACAAACTTATCAAGGTCACCGCGATGTCGCAGTTTGGTCTCCTATACTCTACGGTGCGGCCGTTCCGGTTTCGCCTTACTTGTCGGAGATTCTCCGGCAAGATCAAACTTCAGGTGGAGTGTTGGTCAACATTAAAGTCAATGGGAGAGTTAAGTGGAAAGTTGGGACTTGGGTTTCTGGAAGGTACCATATTGATGTCAACTGTCCGGCGTTTATCAGGGTCGCCAACAATAAGGATGACGATGGTTTCGGAGTTTCTCATCCGGCGGTGAAGTTTCAGTTTTTGCAAAGTTGTGTCGTCGATGTTTAA 666 0.4595 MTKNCDYHEDEHRQLIRRIFAGILSFIVLILLVIFLVWIILRPTKPRFILQDATVFAFNLSSTGETPSSTMPTPNTLTLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQISLATELPQTYQGHRDVAVWSPILYGAAVPVSPYLSEILRQDQTSGGVLVNIKVNGRVKWKVGTWVSGRYHIDVNCPAFIRVANNKDDDGFGVSHPAVKFQFLQSCVVDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04750 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
Tsu02g04750 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 8 221 - -
Tsu02g04750 221 PANTHER OS05G0367900 PROTEIN 8 221 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04750 Tsu-Chr2 56649001 56649874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04750 13 187 EF-hand Containing Proteins AT5G21130 25.000 1.09e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04750 - - pvu:PHAVU_005G120900g 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04750 02 56649001 56649874 Tsu02g04750 02 56649001 56649874 ECH
Tsu02g04750 02 56649001 56649874 Tsu06g01302 06 12272855 12273852 PCT