Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01255 atggcGGAAGCCCTAAGCCCTAACAAACAAAGACTTCCCGTTGCAGCGCGAATCCAATCTCCAACCAGTCCTTTCATATTAGGTTCCAATGACGACCAGCTCGAACGCGCTCAAGCACGTGCAGCACGCGCCGCTGCTATCCGCCGTAAGAATCTCACTGTTTCTCAATCTCTTGATGCCAATTCCGATCCGTGTCTTAACAAACAGCAGATCTTCGATTTGTTCCAGAATTGCATCAAGCTCGCCAGCGAAAATAAAATTAATCAGAAAAATACGTGGGAGTTAAACTTGATTGATCATCTTACTGATATTATTAaagctgaagaagaaaatgatACGGAGACTAATTTTCAGAAGGCAAGCTGCACTCTAGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAACAGAGCAGGCCAAGATGCTGAACAAGACACTACCATGGAGGGTGTTAATGTTGAAAGTGGGCAAGAAGGAAGCAGAAAAGAGACAGATAAAAAGTTGTCACCCTTGTCAACACTGGAACCATCTTTCGAGGTTCTCAATGTAAAGAAGTTTGATGCTGCATTTGTTGTGGATCCCCTCTATCGGCAGACAACTGCAAAATTTGACGAAGGAGGAGCCAAAGGTCTTTTAATGAATAATCTCGGTGTATATGGTGAATGTAGGGTGCTCTTTGATTCACTAGAAGTACCTGCAAAGTGTATGGCAAGCCAAAATGAACCTGATATTTCAGATACTATTGATCTTTCTTTTGTCACAGATTGTGTTGAGCAGATTGTATTGGACATGCGTGTGAAGGATGAAATTTCTCCAACTCTCGGGACTATAGTAAACCAAtttgatgaaaataataaaaggccTGCTGATTTTCAACTTCATGGTCAGAATTCAGTGGAAGATCCTCCTGATGTTGATTTTAATTGTGAAAATGGCGCTGATAGAGATGATTATGAGAACTGTGCGAACTGGAGTGATGATCATGATGACCAACCAGTTGTTGCTGATTTAGGCTCTAATGATGTAGATCCAAGTTTCCCTAGTTATCCTCAGGAAAATGAGCTATTTCCTTCCACAGAGCCTGATATGGATGATAGATTTGAAAATGTTGATGGGTTCTTATTCTTGAGTCTGGGTttcaattcaaaacaaaatgcATGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCGAAAGTCTCTGAGGTTCAACCTACTTCTGAAGATGGCCCAACCCTGAAAACTAAGCAAACAAAGAGTAAGAAAGCCGAAGTTGATTTAGATTTCACAAATTCTCTGGAGAAAAACTTGTTGAATATATTTGCTCCTCCCAAGAATCCCAAAACATTACTTCTCCCTGAAAGCAGACCGCCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAGGAACTTGTCAAGCTATTTCTTCTTCCGGATGTGAAGTGTCTTGGGAGGAGGGCAAAAAGATTCTCAgATTCAGATGGATCTAGAGATCAATTCAATGAGAATGATATATATCCTTCTTGGGATAATGGAAGTGCTTGTGGTGGTGATGAGGCTGGTGACTATGAAGGTGATCATCACAGTGACCTGGAAGACCCTGGCACTCTTATTACCCAGCCTCGTCAGGTCAGTAAAATCGAAGTCCAGTATGACAAAACGTCCAAACAAGTTGATGTTCAAGCACTAAAAGTTACTCTTTGGGACCATGTTCAAGCATGTGATAAGCTTCCTCCTGTTCAGgGGCAAGAAGAAATAGTATCTTTCCGGAATTTATTGGCTAACTTTCCTGGCGATTGCAATGCCGCTGCAAACATCAGTGACATCTCTCCTCATCTGTGCTTCATATGTCTTCTACATTTGGCAAATGAGAAAGGATTGAGCATTCAAAGCTTTCCCAACTTGGATGATCTTTCAATACGCCTTCCATATGTTGGCGATAGTGGAACAGTTTAG 2007 0.4056 MAEALSPNKQRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAAIRRKNLTVSQSLDANSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEQDTTMEGVNVESGQEGSRKETDKKLSPLSTLEPSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGECRVLFDSLEVPAKCMASQNEPDISDTIDLSFVTDCVEQIVLDMRVKDEISPTLGTIVNQFDENNKRPADFQLHGQNSVEDPPDVDFNCENGADRDDYENCANWSDDHDDQPVVADLGSNDVDPSFPSYPQENELFPSTEPDMDDRFENVDGFLFLSLGFNSKQNAWAGPDHWKYKKSKVSEVQPTSEDGPTLKTKQTKSKKAEVDLDFTNSLEKNLLNIFAPPKNPKTLLLPESRPPCNTKLPEDCHYQPEELVKLFLLPDVKCLGRRAKRFSDSDGSRDQFNENDIYPSWDNGSACGGDEAGDYEGDHHSDLEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKVTLWDHVQACDKLPPVQGQEEIVSFRNLLANFPGDCNAAANISDISPHLCFICLLHLANEKGLSIQSFPNLDDLSIRLPYVGDSGTV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01255 668 MobiDBLite consensus disorder prediction 533 553 - -
Tsu06g01255 668 MobiDBLite consensus disorder prediction 153 183 - -
Tsu06g01255 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 IPR022816 GO:0000796|GO:0007076
Tsu06g01255 668 MobiDBLite consensus disorder prediction 154 168 - -
Tsu06g01255 668 PIRSF Condensin_H 541 660 IPR022816 GO:0000796|GO:0007076
Tsu06g01255 668 PIRSF Condensin_H 1 549 IPR022816 GO:0000796|GO:0007076
Tsu06g01255 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 - -
Tsu06g01255 668 Pfam Condensin complex subunit 2 23 546 IPR022816 GO:0000796|GO:0007076
Tsu06g01255 668 Pfam Condensin complex subunit 2 549 658 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01255 Tsu-Chr6 11785949 11790566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01255 K06676 - gmx:100793772 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01255 06 11785949 11790566 Tsu06g01255 06 11785949 11790566 ECH
Tsu02g04791 02 57059935 57065281 Tsu06g01255 06 11785949 11790566 PCT