Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04791 ATGGCGGAATTCGGAAGCCCCAATCCAACAACTCTTCACAAAAAGAAGCTTCCCATGTCCACAACCAATTTCTTCGTCGGCTCCAACGACGACCAACTCGAACGCGCCGCTGCCCGTGCTGCACGTGCCGCTGCTATCCGCCGTACTTCCTGTGCCTTTAACTTCAATCCTCAACCCTCCGATTCTGATCCTGTTCTCAACAAGAAGCAGATTCTCGAGTTATTTCAAAATTGCATTAAGCTTGCTTCAGAAAATAAAATTAATCAGAAAAATACatgggatttggatttgattgaTCATCTTACTGATATTATTAGGGCTGacgatgataataatgatgcgGAAACTAATTTTCAAATGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCGGTGTATTCTGAGGCATATAAAGTCCTTGCTAGAATGAATAGGGCAGGCCACGAAACGGAGCAAGAGAGTGTTAATGCTGAAGGTGGGCAAGAAGATAGCAAGAAGGGAATCGTAAAAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGTTGCATTTGCTGTGGATCCCCTCTATCGCCAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAAGGTCTTTTGATGAATAACCTCGGTGTATATGGTAGATGTAGGGTGCTCTTTGATTCACTAGATGTGCCAGGGACGTATGTAGCTAGTCAAAATGAACATGATATTTCAGATGTAATTGATCTTTCTTTTGCAAGAGATTGTGTTGAACAGATGGTATTGAACATGCATATTAAGGATGCAATTTCTCCAACTCTCGGGGTGATAGTAAATCAATTCAATGAAAATAGTAGAAGGCCCTCTGATTTTCAATTTCACGGGCAAAAATCAGCAGAAGAGTTTGATGCAGCTATTGATTGTGAAGTTGGGGCTGAATCAGAAGAAGACCACGAGAACTTCCCAAGTTGGCCTTATGAACATGACAACCAAACATTTGTTGCTGAACTGGGCTCTAATGATGTAGACCCAAAATTTTCAAGTTATCCTCAGGAGAAAGAACCTTTTCCTTCCAAAGACCCTGACATGGATGAAATATTTGGAAATGTTGATGAGTATCTATTTGCTAGTCTGGGTTTTAGGTCAAAGAAAAATGCGTGGGCAGGTCCGGCTCATTGGCAGTACCGAAAAGCTAAAGGTTCAGAGTCAGAAGTTCATTGTTCTTCTGAAGATGGGTCATCCCTCAAAACTAGGCGGCCAAGGACTACGAGACAGATCGAAGTGGATTtaaatttcacaaattttcttgGGAAAACACTTCCAGATATCTTTGCTCCTCCTAAGAATCATAAATCGTTATTACTCCCTGAAAATAGACCCGTTTGTGTTACAAAACTCCCAGAGGACTACCACTACGAGCCAGAGGATCTTGTCAAGTTATTTCTTTTGCCTAATGTAAAGTGTCTTGGGAGGAGGACGAGAAAGTTCTCAGCCTCAGATGAAGATGGATCGACAGAGCAATGCAATAACAATGAACCATTCAATTCATGGGATAATGGAAGTGTTTGTGATGGTGAGTATGATGGTGCACATAGTGACATGGATGACTCAAACACACTTATTTCTCAGCCTCGTCAGGTCAACAAAATTGAAGTTCAATATGACAAAACTTCCAAACAAGTTGATGTTCAGGCACTGAAATTTACTCTTTGGAACTGTATTCAAGAAATTCAAGAATCCGTTCAACTTCCTTTACAGGGTGAGAAAGAAATGGCGTCTTTCAGGCATATATTAGCCAACTTTCCTAGTGAATGCAATGCTGCTGCAACCGTTACTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGAGTTGAGCATCCAAAGCTGCCCCAACTTGGATGATCTTCACATATATATGCCTACATGA 1983 0.3999 MAEFGSPNPTTLHKKKLPMSTTNFFVGSNDDQLERAAARAARAAAIRRTSCAFNFNPQPSDSDPVLNKKQILELFQNCIKLASENKINQKNTWDLDLIDHLTDIIRADDDNNDAETNFQMASCTLEAGVKIYSLRVDSVYSEAYKVLARMNRAGHETEQESVNAEGGQEDSKKGIVKKLSPLSTLESSFEVLNVKKFDVAFAVDPLYRQTSAKFDEGGAKGLLMNNLGVYGRCRVLFDSLDVPGTYVASQNEHDISDVIDLSFARDCVEQMVLNMHIKDAISPTLGVIVNQFNENSRRPSDFQFHGQKSAEEFDAAIDCEVGAESEEDHENFPSWPYEHDNQTFVAELGSNDVDPKFSSYPQEKEPFPSKDPDMDEIFGNVDEYLFASLGFRSKKNAWAGPAHWQYRKAKGSESEVHCSSEDGSSLKTRRPRTTRQIEVDLNFTNFLGKTLPDIFAPPKNHKSLLLPENRPVCVTKLPEDYHYEPEDLVKLFLLPNVKCLGRRTRKFSASDEDGSTEQCNNNEPFNSWDNGSVCDGEYDGAHSDMDDSNTLISQPRQVNKIEVQYDKTSKQVDVQALKFTLWNCIQEIQESVQLPLQGEKEMASFRHILANFPSECNAAATVTDISPHLCFICLLHLANEKELSIQSCPNLDDLHIYMPT 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04791 660 PIRSF Condensin_H 3 266 IPR022816 GO:0000796|GO:0007076
Tsu02g04791 660 PIRSF Condensin_H 258 549 IPR022816 GO:0000796|GO:0007076
Tsu02g04791 660 PIRSF Condensin_H 537 659 IPR022816 GO:0000796|GO:0007076
Tsu02g04791 660 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 660 - -
Tsu02g04791 660 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 660 IPR022816 GO:0000796|GO:0007076
Tsu02g04791 660 Pfam Condensin complex subunit 2 546 656 IPR022816 GO:0000796|GO:0007076
Tsu02g04791 660 Pfam Condensin complex subunit 2 26 546 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04791 Tsu-Chr2 57059935 57065281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04791 K06676 - gmx:100777082 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04791 02 57059935 57065281 Tsu02g04791 02 57059935 57065281 ECH
Tsu02g04791 02 57059935 57065281 Tsu06g01255 06 11785949 11790566 PCT