Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01253 ATGGCTAACCCAAACTCTCTTCCACTCTATGAAAAATATTGGTACAAACACAATTACAAAAGGGTATTAGATAGCTTGATTTTAATCCTTCTTTTGTTGTTAATTGTTTATCGTATTATCTTTGTCAACAACTACTCTTTTCCTTGGTTTGTTGCTTTAATATGTGAAACATGGTTCACCATATCTTGGATTTTCACTACTAGCACTCAATGGACTCCTGCTTTTATCAAAACCTACCCTGACCGTCTCCTCCAAAGTGTGCAAGAACTTCCAGCAGTAGATTTATTTGTAACAACAGCAGATGACAACCTAGAACCACCAATCATAACAATAAACACTGTCTTATCACTATTAGCACTTGATTATCCATCTCATAAGCTAGCTTGTTACGTTTCTGATGATGGTTGTTCTCCTTTAATGTTCTATGCTCTTAATGAAGCTTCAAAATTTGCAAAACATTGGGTACCTTTTTGTAAAAAGTACAATGTACAAATTAGAGCTCCATTTAGATATTTTTGTGATGAAGACAACAAATGCATGGACCATAATGAAGAATTCAGACAAGAATGGTCACGAATGAAGGATATCTATGATAATCTTAGCCTTAAAATTGATGTGGACCCAAACTCAATTCCAAATTTGCTTGAAGGAGAATATTCCGTTTTCTCAAATACTCACAGAACAAATCATCCAACCATAATCAAGgttATATGGGAGAACAAGGAAATGGTTGAAGATGGAGGATTGCCACATTTGATATACATATCTAGAGAGAAGAGGCCAAAGCAACCACATCATTTCAAAGCCGGTGCCATGAATGTGTtgACAAGAGTATCCGGGTTGATTACAAATGCACCCTTCCTATTGAATGTGGATTGTGACATGTTTGTAAACAATCCAAAGACTGTTCTTCATGCAATGAGCATTTTGCTTGATTCAAAGGGAGAAAAAGAAGTTGCATTTGCTCAATGTCCCCAACAATTttatgctacactcaaagacgATCCTTTTGGAAATCAATTGACGATTTTGTATAAGTACCTTGGAGCTGGATTAGCAGGGCTCCAAGGAATATTCTACGGAGGAACAAATTGCTTTCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATGACGTGGAAAAGGGAAACAAGTTATCAGATGAGgagttaaaacaaaaatttggaGCTTCAAAGCAACTTATGAAATCAGTTGTTGATACTTTTGAAGGGAGGATATATGCACCTAGTGATGTTATTGATGTTTGTAAAGCTGTTGAAGAAGCTAATCAAGTTGCTGGCTATGGATATGAATACAGAACTGGCTGGGGTAAACAGGTAGGTTGGATGTATGGTTCAATAACTGAGGATGTACATACTGGATTAACAATACATGAAAAAGGTTGGAGATCAGAATTATGTTCACCAGATCCAATAGCCTTCAGAGGTTGTGCTCCAATTAGTGGTCCAACATCAATGTCCCAACACAAGAGATGGGCCACAGGAATGCTTGAGATTTTCTTTGGCAAACATTGTCCTATTTTTTGCACCATGTTTGGTAAGCTTTCTTTTAGGCAATTTTTAGCTTATATGTGGATCATAAATTGGGGATTCAACCCAGTTGCTCAAGTATGCTATGCTTCTCTCACTGCTTATTGCATCATTACCAACTCCAATTTCCTACCAAAGGATTGGGGCATATATATTCCAACTGCAATATTTGtgatttacaaaatatatactcTATATGAATACTTGAACTCTGGAATGTCAATTAGAGCATGGTGGAACAATCAAAGAATGTCATTAATAACACCGATGAACGCCGGATTATGCGGATTTATTACAGTCCTACTCAAGTTATTAAGAATTTCCGACACGGTTTTTGACATAACAAAGAAAGACCTCCCCCCATCTAACGACGACGCACACGATAAGAATGCCGGTAGACACACGTTCGACGAGTCGTTAGTTTTTTTGCCGGGAACTACCATCTTGTTGTTGCAATTAACAGCAGTATTTATCAAGTTATTTGGATTGCAACCACAAGGAGTACTAAGTGGGAATTATGAGTGTGGAATGGGTGAAATTTTGTGTAGTGTGTATGTGATCATATGTTACTGGCCATTTCTTAAAGGATTGTTTGAGACAGTAATGAAAGATGAACCGCCACGACCACTTGACATTGTTCCGGTTCCAGTTCAACCGCCACCAATATCAATTAACACTGGACATCATTTTGTGACTGAGGCTAAAGAGGAGTCCAAAGATTGCGAACGGAGTGGCAAGTACGTGTCACCTACAAAGAAGTTGAAATCCGATTGTACGGGAACGAGGAAGTGCGGATGTCCATTCCGACTTCGTGGTTATtacacaaaagaaacaaagttatGGCATATGAGAGTGGTGAATGGCATACACAAACACGAGTTGGACACGGAGCTTGAGGGGCATCTTGTGGCGGGTCGGTTGAAGCCAGAAGACAAGGTATTCTTGGATGAAATGACCAAGAATTTTGTTCCACCAAGAAATATCAACTCGACATTGAAAGATAGAGATCCCGAGAACACGATGTCATCAAAGCAAGTATGCAACGCCCGATATAGGTATAAAGCTAAAATAAGGGCGTTCATGAGTGAAATGCAACACTTATTCAAACATCTGGgcgacaacaaatattttttcaagtgtCGGTCGCTTGTTGATGAAGGAGGTGAATATCTTCAAGATCTTTTCTTTGCACATTCAAGATCCGTGAGCTTGTTGAACTCTTTTCCCACTGTCTTGTTGATGGACTCGACGTACAAaaccaacaagtacaacatgcctttatttgagatagtcgggTTCACTTCAACCGAGAGGACGTATAATGTTGGTTTTGCCTGGCTTACAAacgagaaagaagataatttcattTGGGCTCTACAACAATTGCGGTCACTTGTAAGGAATGAAGGTAGTTTGCCTAAGGTGATTTTGACCGACAGAGATACGGCACTGATGAATGTTGTTGCCCAAGTATTTCCAACATCGGCTGTATTGGTTTGTCGGGTTCATGTTGAGAAAAATGTGGGGTCCAAGATAAAGGAGCTAGTGAAAGTAAGACAAGGAGAAGAGagCATGTCTATAGAGGAACACAGATACCAGGATGTTAAACTGTACTCTTTGTTAGCTTTCAAAGTTTCTAGAGCGGCATTGGATTACATCTACCAAGAAGCAAAAAGAGTCGACAATGTTGGTATGGATTGCAAAAAGTGTGGCTGTTTGATGAGAGTTAATTATGGGTTGCCATGTGCATGTTTGATTGCTAAGAAGCTAAGACACAACCAACCTATTAGACTAGACGAGGTGTACAATCACTGGAAGAGGTTGTGTTTCAATAATGAAGAAGTCGGTGGGGACGTCCAGGACGATTATTCATGCACGGCAGAGTGGGAAGAAATTAAGCAATTTGCGTGA 3462 0.3746 MANPNSLPLYEKYWYKHNYKRVLDSLILILLLLLIVYRIIFVNNYSFPWFVALICETWFTISWIFTTSTQWTPAFIKTYPDRLLQSVQELPAVDLFVTTADDNLEPPIITINTVLSLLALDYPSHKLACYVSDDGCSPLMFYALNEASKFAKHWVPFCKKYNVQIRAPFRYFCDEDNKCMDHNEEFRQEWSRMKDIYDNLSLKIDVDPNSIPNLLEGEYSVFSNTHRTNHPTIIKVIWENKEMVEDGGLPHLIYISREKRPKQPHHFKAGAMNVLTRVSGLITNAPFLLNVDCDMFVNNPKTVLHAMSILLDSKGEKEVAFAQCPQQFYATLKDDPFGNQLTILYKYLGAGLAGLQGIFYGGTNCFHRRKVIYGLSPDDVEKGNKLSDEELKQKFGASKQLMKSVVDTFEGRIYAPSDVIDVCKAVEEANQVAGYGYEYRTGWGKQVGWMYGSITEDVHTGLTIHEKGWRSELCSPDPIAFRGCAPISGPTSMSQHKRWATGMLEIFFGKHCPIFCTMFGKLSFRQFLAYMWIINWGFNPVAQVCYASLTAYCIITNSNFLPKDWGIYIPTAIFVIYKIYTLYEYLNSGMSIRAWWNNQRMSLITPMNAGLCGFITVLLKLLRISDTVFDITKKDLPPSNDDAHDKNAGRHTFDESLVFLPGTTILLLQLTAVFIKLFGLQPQGVLSGNYECGMGEILCSVYVIICYWPFLKGLFETVMKDEPPRPLDIVPVPVQPPPISINTGHHFVTEAKEESKDCERSGKYVSPTKKLKSDCTGTRKCGCPFRLRGYYTKETKLWHMRVVNGIHKHELDTELEGHLVAGRLKPEDKVFLDEMTKNFVPPRNINSTLKDRDPENTMSSKQVCNARYRYKAKIRAFMSEMQHLFKHLGDNKYFFKCRSLVDEGGEYLQDLFFAHSRSVSLLNSFPTVLLMDSTYKTNKYNMPLFEIVGFTSTERTYNVGFAWLTNEKEDNFIWALQQLRSLVRNEGSLPKVILTDRDTALMNVVAQVFPTSAVLVCRVHVEKNVGSKIKELVKVRQGEESMSIEEHRYQDVKLYSLLAFKVSRAALDYIYQEAKRVDNVGMDCKKCGCLMRVNYGLPCACLIAKKLRHNQPIRLDEVYNHWKRLCFNNEEVGGDVQDDYSCTAEWEEIKQFA 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01253 1153 Pfam MULE transposase domain 928 1024 IPR018289 -
Tsu06g01253 1153 Pfam Cellulose synthase 93 384 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tsu06g01253 1153 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 719 - -
Tsu06g01253 1153 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 719 - -
Tsu06g01253 1153 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 552 IPR029044 -
Tsu06g01253 1153 Pfam Transcription factor AFT 753 811 IPR014842 GO:0000981|GO:0036086
Tsu06g01253 1153 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 380 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01253 Tsu-Chr6 11762917 11775096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01253 8 716 Glycosyltransferase AT2G32540 45.975 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01253 - - cam:101488214 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01253 06 11762917 11775096 Tsu06g01253 06 11762917 11775096 ECH
Tsu06g01253 06 11762917 11775096 Tsu02g04793 02 57082972 57087414 PCT