Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04793 ATGGCCAACAAAAATTCCCTCCCTCTCTATGAAAAAATATGGGTCAAACACACATTTTCAAGAGTTATGGATTCCTTAACATTGCTTCTCCTCTTCTTACTTCTTGGTTACCGTATTTCCTCTAATAATTACCACACTTTCCCTTGGTTTGTTGCATTTCTATGTGAGTTATGGTTTACCATCACTTGGATTACAACCATGAGCACCAAATGGACTCCTGCACATACCAAAACTTTCCTAGATCGTCTCTTACTTAGGGTATCTAATTCTGAGCTTCCAGCATTGGATTTGTTTGTGACAACAGCAGATCCTGTTCTTGAACCACCAATAATCACAGTGAATACAGTATTGTCTTTATTGGCACTTGATTATCCAGCTAATAAACTAGCTTGTTATGTTTCTGATGATGGTTGTTCACCTCTTACATTCTATGCTCTTATGGAAGCTACAAAATTTGCTGAAATTTGGATACCTTTTTGTAAGAAGTATAATGTACAATGTAGAGCACCATTTAGATACTTTTGTGATGAATCCATGGCACATAATAACTTGCAAGGATTCAAACAAGAATATTTAACAATGAAGGAAGAGTATGAAAAACTCTGTGGTAAAATTCAAAATGCATCCCAAAAGTCAATTCCTTGTCAGCTAATGGGAGAATTTGCTGTCTTCTCACAAACACAAGCTAGAAATCATCCAACTATAATTAAGGTAATACGAGAAAACAAAGGTGTTTCTGATGTGATACCTCACTTAATCTACATATCTAGAGAGAAGAGGCCAAAACAAccacatcatcacaaagctGGTGCAAtgaatgtcttgACAAGAATCTCTGGATTGATGACAAATGCTCCATTTATGCTAAACTTAGATTGTGACATGTATGTGAACAATCCTAAGATTGTATTACATGCCCTTTGCATTTTGTTGGATTCAAAGGGAGAAAAAGAAGTTGCATTTGCTCAATGTCCACAAAGATTCTATGATGCTGTCAAAGATGATGCTTATGGAAATCAGCTTGTGGCTTTGCCTATGTATATAGGAAGTGGTTTTGCTGGACTTCAAGGGATTATATATGCTGgaacaaattgttttcataGAAGAAAAGTCATGTATGGTCTTTCTCCTAATGACATTCAAAATGCAAAGAAGGGTCATGGTTTCACCAATGGAACATTATTATCAGAtaaagaaacaattcaaaaattTGGAACCTCAAAGGGATTTGTTGACTCAGCTACTCATATTTTGGAAGAGACTACATTTTACCCTTACAAATCTCTTGATCTTGAAGTAGCAAGTGAAGTTGCTAGTTGTAATTATGAGTACAACACTGCTTGGGGTAAAGAGGTAGGATGGTTATATGGATCAACATCAGAGGATGTGATAACTGGGCTCAAGTTCCACACAAAAGGATGGAGATCTGAGCTTTGTTCACCAGACCCAATAGCCTTTATGGGCTGTTCACCACAAGATAACTTGGGCCAAATGGCCCAACATAAGAGATGGTCCTCAGGGTTGTTTGATATCTTCCTTAGCAAGCATTGTCCaatttttggtacaatttttgGTAAACTTCAATTAAGAGAGTGCTTAGCATATATTTGGATCACTAATTGGGCTCTAAGATCTATCCCTGAAATATGTTATGCCCTTCTACCTGCTTATTGCATCATTACCAACTCCAGTTTCTTGCCTAACAAGGAACTCAGCATGTGGATCCCCGCAACTCTATTTGCGATATACAACGTATCTAATATAATAGAGCACATAAAATCAGGATTATCAATCAGAACATGGTGGAACAATCAAAGGATGGGAAGAATAACAACCATGACTTCTTGTTTTTTGGGATTCATAACTATCATACTTAAGAAATTGAGAATATCTGACACCAATTTTGAAATAACAAAGAAAGAACAAGTACCTTCTAATGAAGGTGCTAATGAAAATGTTGGTAGGTTCATTTTTAATGAGTCACTTATTTTTCTACCAGGCacaacaattttgtttattCAACTCATAGCACTTTTTATGAGTGGTAATGGATATGGATATGAATATGGATATGGGGTAGGGGAGGTTTTATGTAGTGCATATGTGGTTTTATGCTACTTGCCATTTTTGAAAGGGCTTTTTGGGAAAGGAAAATATGGGATACCTTTGTCCACAATATGGAAGTCAATGGTGTTAGCTTTCACATTTGTTTACTTATGCAGTAGCACCATTGCTAAGTGA 2241 0.3516 MANKNSLPLYEKIWVKHTFSRVMDSLTLLLLFLLLGYRISSNNYHTFPWFVAFLCELWFTITWITTMSTKWTPAHTKTFLDRLLLRVSNSELPALDLFVTTADPVLEPPIITVNTVLSLLALDYPANKLACYVSDDGCSPLTFYALMEATKFAEIWIPFCKKYNVQCRAPFRYFCDESMAHNNLQGFKQEYLTMKEEYEKLCGKIQNASQKSIPCQLMGEFAVFSQTQARNHPTIIKVIRENKGVSDVIPHLIYISREKRPKQPHHHKAGAMNVLTRISGLMTNAPFMLNLDCDMYVNNPKIVLHALCILLDSKGEKEVAFAQCPQRFYDAVKDDAYGNQLVALPMYIGSGFAGLQGIIYAGTNCFHRRKVMYGLSPNDIQNAKKGHGFTNGTLLSDKETIQKFGTSKGFVDSATHILEETTFYPYKSLDLEVASEVASCNYEYNTAWGKEVGWLYGSTSEDVITGLKFHTKGWRSELCSPDPIAFMGCSPQDNLGQMAQHKRWSSGLFDIFLSKHCPIFGTIFGKLQLRECLAYIWITNWALRSIPEICYALLPAYCIITNSSFLPNKELSMWIPATLFAIYNVSNIIEHIKSGLSIRTWWNNQRMGRITTMTSCFLGFITIILKKLRISDTNFEITKKEQVPSNEGANENVGRFIFNESLIFLPGTTILFIQLIALFMSGNGYGYEYGYGVGEVLCSAYVVLCYLPFLKGLFGKGKYGIPLSTIWKSMVLAFTFVYLCSSTIAK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04793 746 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 5 745 - -
Tsu02g04793 746 Pfam Cellulose synthase 95 385 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tsu02g04793 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 626 IPR029044 -
Tsu02g04793 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 192 403 IPR029044 -
Tsu02g04793 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04793 Tsu-Chr2 57082972 57087414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04793 1 737 Glycosyltransferase AT2G32530 45.466 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04793 - - gmx:100779739 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04793 02 57082972 57087414 Tsu02g04793 02 57082972 57087414 ECH
Tsu06g01253 06 11762917 11775096 Tsu02g04793 02 57082972 57087414 PCT