Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01217 ATGGCCTCATgTTGGGCATGGGGAGTGCAGTTGAAACACTATGTGGACAAGCATTTGgagcaaaaaaaatatgaaatgttaGGAATATATTTACAAAGATCAGCAGTGCTTCTCACATTAGCTGGTTTAATATTAACTATAATATACATATTCTCTGAaccaatattattatttctagGTGAATCACCAAAAATTGCATCAGCAGCATCACTTTTTGTCTATGGATTAATCCCACAAATATTTGCCTATGCTTTAAATTTTCCAATCCAAAAATTTCTTCAAGCACAAAGCATAGTAGCACCAAGTGCATATATATCCTCAGTCACATTAATTATTCACCTTATATTAAGTTATATTGTTGTGTTCCAAATTGGGCTTGGTTTATTAGGTGCTTCATTGGTTTTAAGTTTTTCTTGGTGGATAATTGTGATTGCACAATTTGTATATATTGTGAAGAGTGAAAAGTGTAGAAATACTTGGAATGGATTTAGTTTCCAAGCTTTTTCAGGATTGCCAGAATTTTTTAAGTTGTCAGCTGCTTCAGCTGTTATGTTGTGTTTGGAGACTTGGTATTTTCAAATCTTGGTTTTGCTTGCTGGATTACTTCCTCATCCTGAATTAGCTCTTGATTCTCTTTCTATTTGTACTACAATCTCTGGATGGACGTTCATGATCTCAGTTGGATTTAATGCAGCTGCAAGTGTGAGAGTGAGCAATGAATTAGGGGCAGGAAATCCGAAATCAGCCTCATTTTCTGTGGTGGTTGTGACAGTGATTTCTTTCATAATATGTGTTATTATAGCACTTGTGGTGCTTGCATTAAGGGATATCATTAGCTATATCTTCACAGAGGGTGAAGAAGTTGCTGCTGCTGTCTCAGATCTTTGTCCACTTCTTGCTCTTGCCATTGTCCTCAATGGCATTCAACCTGTCTTATCtggtaattaa 948 0.346 MASCWAWGVQLKHYVDKHLEQKKYEMLGIYLQRSAVLLTLAGLILTIIYIFSEPILLFLGESPKIASAASLFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISSVTLIIHLILSYIVVFQIGLGLLGASLVLSFSWWIIVIAQFVYIVKSEKCRNTWNGFSFQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTISGWTFMISVGFNAAASVRVSNELGAGNPKSASFSVVVVTVISFIICVIIALVVLALRDIISYIFTEGEEVAAAVSDLCPLLALAIVLNGIQPVLSGN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01217 315 PANTHER PROTEIN DETOXIFICATION 19 314 - -
Tsu06g01217 315 CDD MATE_eukaryotic 22 314 IPR045069 GO:0042910|GO:1990961
Tsu06g01217 315 Pfam MatE 21 119 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g01217 315 Pfam MatE 181 314 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g01217 315 TIGRFAM matE: MATE efflux family protein 22 314 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g01217 315 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01217 Tsu-Chr6 11318992 11328257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01217 K03327 - gmx:100801718 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01217 06 11318992 11328257 Tsu06g01217 06 11318992 11328257 ECH
Tsu02g04816 02 57347353 57352913 Tsu06g01217 06 11318992 11328257 PCT