Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01185 ATGTCACTAAACTCAACCTTTCTTGTTTTTCCTAGTTTCTTCAAACCTCAAAAACTAGGAAGAACTAATATTCTAGGCCACATAATTGGTTCTCCCTTTCCATGTTATGCTACTAATACTAATACAAATATTTCTCAAAGAAAATCAGCCAATTACCAACCCACTATTTGGAATTACGATACTTTACAATCTTTGAAACACGATTATACGGATATTCAATATGTGGTTAGGGGAAGGAGGCTGCAAGAGGAAGTAAGGAGCATGATTAAGGGAGAAAATGTAGATATATTGGAGTTAATTGACATTGTTAAACGCTTAGGCCTCAACTACCATTTCGAAGAGGAGATAAGAGAAGCCATTGATAGGTTTTTGTCTTTggaaaaatttaataataaaattattcacttaAGTCTACATGAAACTGCTTTGAGATTCAGGTTACTTCGAGAATATGGCTATGATGTTTCAGAAGATATTTTTGAGAGGTTTAAGGACCACAATGGAAATTTTAAAGAATGTCTAGTCAAAGATACCAAAGGAATGTTAAGTCTCTATGAGGCATCATTTCTATCTTATGAAGGAGAACAAATTTTGGATGAAGCTAATGCCTTCACAAGCTTCCACCTCAGAGGCCTTAAAGAAGATAAAAGTAATTTTCTCTTAGAACAAGTGAATCATTCATTGGAACTTCCACTACATCGTAGATTCCAAAGGCTTGAAGCTCGATGGTATATTGAGTCATACCAAAAAACAAAGGATGCAAACATGGTCTTAGTTGAAGCTGCCAAAATGGATTTCAACATTTTGCAATCAAATCTACAACAAGAACTTAAAGAAATGTCTAAGTGGTGGAAGGGGATGGGACTTGCCCCAAGGTTAAGCTTTGGTCGTGACAGACTAATGGAATGTTATTTTTGGGCGGTTGGAATGACACCTTTTGAGGCTAAGTTTAGTAATCTCCGCAAGGGTTTAACCAAAGTAGCATCTCTAATAACCTTAATAGATGACATATATGATGTATATGGCACCTTGGATGAATTACAACTTTTCACAACGGCTGTTGAAAGTTGGGATATTAATGCAATTCAAATTCTTCCGGAATACATGAAAATATTCTTCTTAGCACTCTATAATACTGTCAATGAATTCGCATACGACACACTTAAGGACAAAGGACATGACATCCTTCCCTACCTCATCAAAGCGTGGTCTGATATGTTGAAAGCATTTCTACAAGAAGCAAGGTGGTGTCATGATAaacaattgccaaaatttgatgACTACCTCAACAATGCTTGGGTGTCTGTCTCCGGTGTAGTTTTATTGACTCATAGCTATTTTCTACTAAATCATAGCATAACAAAGGAGGGACTTGAATACTTGGAAAATTGTCATATGTTGTTGAGGAGACCATCCATTATTTTTCGACTTTGCAATGATTTGGCTACTTCATCGGCTGAGTTACAAAGAGGTGAAGGAGCTAATTCAATTATATGCTACATGAACGAAAATGGTGTTAGTGAAGAAGCTGCTTACAAACACATCCATAGTTTGCTTAATGAAACTTGGAAAAAGATGAACAAAGATAGAGTTACCAATTCAACTTTCTCAAAATATTTCGTGGAAATAGCAATCAACCTTGCTAGAATTTCTCACTGCACGTATCAATATGGAGATGGTCATGGTGCCCCTAATACTATAGCAAGGAATCGAATAAAGGCATTAATACTTGAACCCATTGATTAA 1746 0.3528 MSLNSTFLVFPSFFKPQKLGRTNILGHIIGSPFPCYATNTNTNISQRKSANYQPTIWNYDTLQSLKHDYTDIQYVVRGRRLQEEVRSMIKGENVDILELIDIVKRLGLNYHFEEEIREAIDRFLSLEKFNNKIIHLSLHETALRFRLLREYGYDVSEDIFERFKDHNGNFKECLVKDTKGMLSLYEASFLSYEGEQILDEANAFTSFHLRGLKEDKSNFLLEQVNHSLELPLHRRFQRLEARWYIESYQKTKDANMVLVEAAKMDFNILQSNLQQELKEMSKWWKGMGLAPRLSFGRDRLMECYFWAVGMTPFEAKFSNLRKGLTKVASLITLIDDIYDVYGTLDELQLFTTAVESWDINAIQILPEYMKIFFLALYNTVNEFAYDTLKDKGHDILPYLIKAWSDMLKAFLQEARWCHDKQLPKFDDYLNNAWVSVSGVVLLTHSYFLLNHSITKEGLEYLENCHMLLRRPSIIFRLCNDLATSSAELQRGEGANSIICYMNENGVSEEAAYKHIHSLLNETWKKMNKDRVTNSTFSKYFVEIAINLARISHCTYQYGDGHGAPNTIARNRIKALILEPID 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01185 581 PANTHER TERPENE SYNTHASE 12-RELATED 39 580 - -
Tsu06g01185 581 SFLD Terpene Cyclase Like 1 C Terminal Domain 255 580 IPR034741 -
Tsu06g01185 581 SFLD Isoprenoid Synthase Type I 255 580 - -
Tsu06g01185 581 Gene3D - 94 254 IPR036965 GO:0010333|GO:0016829
Tsu06g01185 581 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 53 253 IPR008930 -
Tsu06g01185 581 Coils Coil 259 279 - -
Tsu06g01185 581 CDD Terpene_cyclase_plant_C1 47 579 IPR044814 GO:0010333|GO:0016102
Tsu06g01185 581 SUPERFAMILY Terpenoid synthases 257 580 IPR008949 -
Tsu06g01185 581 PANTHER OS04G0344100 PROTEIN-RELATED 39 580 - -
Tsu06g01185 581 Pfam Terpene synthase, N-terminal domain 56 228 IPR001906 GO:0010333|GO:0016829
Tsu06g01185 581 Gene3D Farnesyl Diphosphate Synthase 54 568 IPR008949 -
Tsu06g01185 581 Pfam Terpene synthase family, metal binding domain 261 525 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01185 Tsu-Chr6 10932130 10939028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01185 K12742 K19968 ag:AAV36465 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04857 02 57700620 57707178 Tsu06g01185 06 10932130 10939028 PCT