Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01144 ATGGTTGACGTTGAAAATGAGCCTCCACCACGTATTGAGGGAAAATTTGCTGCATTGGTGGTTTGTTGGCTTCTTGGCAATGGTGTTCTTTTCTCTTGGAACAGTATGCTAACAATAGTAGATTACTATGAATATTTGTTTCCGAACTATCATCCCTCTAGAATGCTCACTCTTATGTATCAACCATTTGCATTTGGAACAATAGCAATACTAGCTTACAATGAGGCGAAAATCAATACAAGAAAGCGGAATCTAACTGGATATTTGCTCTTTTTCTTGAGCGTTTTGGCTGTGTTAATTTTGGATCTTGCAACATCCGGTAAAGGAGGGATTGGAACTTTCATCGGTATATGCATATGTAGTGGTCTTTTTGGAATAGCAGATGCCCATGTACAAGGCGGTATGGTGGGAGACCTATCCTACATGCTACCAGAATTCATTCAGTCTTTCCTTGCTGGAACTGCAGCGTCAGGTGCCCTAACATCGGCTTTGAGGTTGATTACAAAAGCAATATTTGAGAATTCTTCAAACGGTCTTCGCAAAGGAGCTATTATGTACTTTGCCCTATCATCATTTTTTGAGTTTCTATGTGTTATGCTCTACGCGTTTGTCTTTCCAAAATTATCGATTGTGAAGTACTACCGTTCGAAAGCAGCTTCTGAAGGATCCAAAACTGTGTCAGCTGATCTTGCTGCCGCTGGCATCCAGACCTCACCTGGAGGAGACAAGGAAGATTCAAAGGAACGAGAGCGCAAAGGAATAAAACAATTGTTATTCGAAAACATTGATTATGCACTTGATTTGTTCCTAACATATGTGCTCACACTGTCGATTTTCCCTGGTTTCTTATCAGAAGATACAGGATCACACAGTTTAGGCACCTGGTACGCCCTTGTTTTAATTGCTATGTTtaatgtgtttgattttatCGGAAGATACATTCCGCTCGTGAAAATCTTGAAGATGGAGTCTAGAAAGTTGATCACTATGGCAGTCATTTCTCGTTTTTTACTTATACCGGCATTTTATTTCACTGCAAAGTACGGTAAACAAGGTTGGATGATATTGTTGACATCGTTCTTGGGGTTATCCAATGGTTACCTCACTATCTGTGTTTTCACTTCCGCACCTAAAGGTTACAAGGGACCTGAACAAAATGCTTTGGGAAATATGTTGGTTTTGTGTCTTCTTGGAGGTCTTTTTGCAGGGGTGACACTTGACTGGTTGTGGTTAATAGGTAAAGGATGGTGA 1251 0.4013 MVDVENEPPPRIEGKFAALVVCWLLGNGVLFSWNSMLTIVDYYEYLFPNYHPSRMLTLMYQPFAFGTIAILAYNEAKINTRKRNLTGYLLFFLSVLAVLILDLATSGKGGIGTFIGICICSGLFGIADAHVQGGMVGDLSYMLPEFIQSFLAGTAASGALTSALRLITKAIFENSSNGLRKGAIMYFALSSFFEFLCVMLYAFVFPKLSIVKYYRSKAASEGSKTVSADLAAAGIQTSPGGDKEDSKERERKGIKQLLFENIDYALDLFLTYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMFNVFDFIGRYIPLVKILKMESRKLITMAVISRFLLIPAFYFTAKYGKQGWMILLTSFLGLSNGYLTICVFTSAPKGYKGPEQNALGNMLVLCLLGGLFAGVTLDWLWLIGKGW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01144 416 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 415 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu06g01144 416 Pfam Nucleoside transporter 125 410 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu06g01144 416 PIRSF ENT 4 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu06g01144 416 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 415 IPR030200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01144 Tsu-Chr6 10446349 10455103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01144 5 414 Organic Solute Cotransporters AT4G05120 69.024 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01144 K15014 - gmx:100798899 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04882 02 57944090 57947039 Tsu06g01144 06 10446349 10455103 PCT