Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04882 ATGGTCGACATTGAGCCTCCAACGCGTCTAGAGGGAAGATATGCTGCAATAGTGGTATGCTTTCTTCTTGGCAATGGATGTCTTTTCTCATGGAACAGTATGCTTACAATTGAAGATTACTACATTTACTTGTTTCCAAAATATCATCCCTCAAGAGTGCTTACACTTGTATATCAACCATTTGCAGTTGGGACACTTGCTATATTGTCTTATAATGAGGCAAAAGTCAATACTAGATTAAGGAATTTGTTTGGATATATTCTATTTTTCATAACCACTTTGTTGGTGTTAgtaATTAATTTAGCAATATCTGGTAAAGGAGGAATTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCATTTGGAGTTGCAGATGCTCATGTTCAAGGAGGAATGGTGGGTGACTTGTCCTACATGCACCCAGAATTCGTTCAGTCCTTCTTTGGTGGTTTGGCAGCATCTGGTGCATTAACATCTGGTTTAAGGTTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTTAGAAAAGGAGCTATTCTATTCTTTGCCATATCATCATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATTTGTTTTTCCTAAAATACCAATTGTGAAGTACTACCGTTCAATCGCTGCATCCGAAGGATGCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGAATCCAAAGAGTACTATTTCTTTCTTCTGATGACGACTTTGCACAAACACAAGAGAGGAAGGGAAACAAGCAATTGTTTCTTGAAAACATTGATTATTTAGTTGATATGTTCCTAATATTTGCATTGACACTGTCTATTTTCCCTGGATTCCTTTCTGAAGACACTGGAGCACATAGTTTAGGAACTTGGTATGCACTTGTGTTAATTGCAATGTATAATGTGTGGGATCTAATAGGAAGATACATCCCACTCTTGGAGTTCTTGAAATTGGAGTCACGAAAATTCATCACGGTTGCAATTCTATGTCGTTTCTTACTTGTTCCGGCTTTTTATGTCACTGCAAAGTATGGTGATCAGGGTTGGATGATAATGTTGACATCATTCTTAGGGCTATCGAATGGTTACCTCACTGTCTGCGTTATGACATCTGCGCCCAAAGGATATAAGGGGCCAGAACAAAATGCATTGGGAAACATGTTGGTGCTGTTTCTACTTGGAGGTATTTTTGCAGGGGTGACATTAGACTGGTTGTGGTTGATAGGTAAAGGTTGGTGA 1251 0.3853 MVDIEPPTRLEGRYAAIVVCFLLGNGCLFSWNSMLTIEDYYIYLFPKYHPSRVLTLVYQPFAVGTLAILSYNEAKVNTRLRNLFGYILFFITTLLVLVINLAISGKGGIGTFIGICAISGAFGVADAHVQGGMVGDLSYMHPEFVQSFFGGLAASGALTSGLRLITKAAFENSKDGLRKGAILFFAISSFFELLCVLLYAFVFPKIPIVKYYRSIAASEGCKTVSADLAAGGIQRVLFLSSDDDFAQTQERKGNKQLFLENIDYLVDMFLIFALTLSIFPGFLSEDTGAHSLGTWYALVLIAMYNVWDLIGRYIPLLEFLKLESRKFITVAILCRFLLVPAFYVTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNMLVLFLLGGIFAGVTLDWLWLIGKGW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04882 416 PIRSF ENT 7 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu02g04882 416 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 415 IPR030200 -
Tsu02g04882 416 Pfam Nucleoside transporter 123 410 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu02g04882 416 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 415 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04882 Tsu-Chr2 57944090 57947039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04882 5 414 Organic Solute Cotransporters AT4G05120 69.756 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04882 K15014 - gmx:100798899 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04882 02 57944090 57947039 Tsu02g04882 02 57944090 57947039 ECH
Tsu02g04882 02 57944090 57947039 Tsu06g01144 06 10446349 10455103 PCT