Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01134 ATGGCCGCCGTAACTTCTTCATTCTCCTTCTCAACACTCACTCAATCTTCTCAAAACAAACACCTAACCTTTTCTTCCACTCGCTTCCTTAGTTCCGATTCAGATACCGTTCGCTTCCGTTTGAGCTTATCATCAAACTATGTTGGAGTTCGAACTTCCAATTCCATTTCCAAAATGATTGTTCGGTGCTCCTCTTCTGTTTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAGTCGACCAATACCTAGTATCTACAATTCCGTGCTGCAGGAGCTCATTGTCCAGCAACATCTgatgagatacaagaagtcataCCGTTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGACCAACTCATGGAAGGGTATCCTAGTGATGAGGACAGCAATGCCATCTTCAAAGCATACATTAATGCATTGAAGGAAGATCCAGACCAATACAGAGTAGATGCACAGAAGTTGGAAGATTGGGCTCGTGCTCAAAATTCAACCTCCTTGATTGAGTTTTCATCTAGAGAAGGAGAAGTTGAGGGTTTTTTGAAGGATATAGCAGAAAGAGCAGGTGGAAAGGGTGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGACTTTTTCGTCTTCTTGAGTTGGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTGCATCTTTGAATGTCAACAAAAGAAGTGTGGATCGGGACTTGGACGTGTATCGCAATCTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTGAAAGAATATATTGACAGggagaagaagaaaagagaagaaaggaCTGAACCACAAAAGGCTAACGAGGCCATTACAAAATGTTTGGGACAGGACCGAACTTTTGATACGATCACAAGTTAA 909 0.3927 MAAVTSSFSFSTLTQSSQNKHLTFSSTRFLSSDSDTVRFRLSLSSNYVGVRTSNSISKMIVRCSSSVSDPPTVSETKLNFLKAYSRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSDEDSNAIFKAYINALKEDPDQYRVDAQKLEDWARAQNSTSLIEFSSREGEVEGFLKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCASLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKREERTEPQKANEAITKCLGQDRTFDTITS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01134 302 Hamap Protein Thf1 [thf1]. 67 275 IPR017499 GO:0010207|GO:0015979
Tsu06g01134 302 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 288 IPR017499 GO:0010207|GO:0015979
Tsu06g01134 302 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 288 - -
Tsu06g01134 302 Coils Coil 249 276 - -
Tsu06g01134 302 Pfam Thylakoid formation protein 72 277 IPR017499 GO:0010207|GO:0015979
Tsu06g01134 302 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 69 274 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01134 Tsu-Chr6 10263683 10267793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01134 - - aip:107632658 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01134 06 10263683 10267793 Tsu06g01134 06 10263683 10267793 ECH
Tsu02g04891 02 58004041 58007363 Tsu06g01134 06 10263683 10267793 PCT