Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04891 ATGGCTGCTCTAACTTCTCTCTCATTCTCAGCAACAACTCAATGCTCACATAGAAAATCAACTCTACCTTCTTCTACTCGTTTCCTTGCTTCCAGTTCTGATATCTTTGGAATAAGGATAGATTCCTCATACTATCATCATGTTGGTGTTAGAGCTGCCAATTCTTCATCTAAAATGGTTATTCAATGCATGTCTTCTGTCACAGATGTTCCACCAAGTGTTTCCGAGACAAAGTTAAATTTCCTAAAGGCATATAAACGACCAATCCCTAGTATCTATAACAATGTGCTGCAGGAGCTCATTGTCCAGCATCATTTAATGAGATACAAGACATCATACCGTTATGATCCTGTATTCGCTCTTGGTTTTGTCACTGTTTATGATAAACTCATGGAAGGGTATTCTAGTGACGAGGAACGAGATGTCATCTTCAAAGCTTATATTAACGCATTGAAGGAAGATCCAGAACAATACAGAATAGATGCACAGAAGTTGGAAGAGTGGGCTAGGACTCAAAACTCTACTTCCCTGGTTGAGTTTTCATCCAAAGAAGGAGAAATTGAAGGGGTTTTAAAGGATATTGCACAAAGAGCAGGAGGAAAGGGTGAATTCAGTTATAGTCGTTTCTTTGCGGTAGGACTTTTTCGCCTTCTCGAGTTGGCAAATGCGACAGAACCAACAATTTTAGACAAGCTTTCTGCGGCCTTGAACATCAACAAAAAAAGCGTTGATCGGGACTTGGATGTGTATCGTATGCTTCTTTCCAAGCTGGTTCAAGCGAAAGAGCTGCTAAAGGAATATATTGACAGggagaagaagaaaagagaagaaagggCGGAACCACAGAAGGCTAATGAGGCCGTTTCAAAATGTTTGGGACAACAATTATCTGTTATGTAG 900 0.39 MAALTSLSFSATTQCSHRKSTLPSSTRFLASSSDIFGIRIDSSYYHHVGVRAANSSSKMVIQCMSSVTDVPPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHLMRYKTSYRYDPVFALGFVTVYDKLMEGYSSDEERDVIFKAYINALKEDPEQYRIDAQKLEEWARTQNSTSLVEFSSKEGEIEGVLKDIAQRAGGKGEFSYSRFFAVGLFRLLELANATEPTILDKLSAALNINKKSVDRDLDVYRMLLSKLVQAKELLKEYIDREKKKREERAEPQKANEAVSKCLGQQLSVM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04891 299 Coils Coil 257 280 - -
Tsu02g04891 299 Hamap Protein Thf1 [thf1]. 68 276 IPR017499 GO:0010207|GO:0015979
Tsu02g04891 299 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 289 - -
Tsu02g04891 299 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 289 IPR017499 GO:0010207|GO:0015979
Tsu02g04891 299 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 73 275 IPR017499 GO:0010207|GO:0015979
Tsu02g04891 299 Pfam Thylakoid formation protein 74 278 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04891 Tsu-Chr2 58004041 58007363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04891 - - gmx:100814341 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04891 02 58004041 58007363 Tsu02g04891 02 58004041 58007363 ECH
Tsu02g04891 02 58004041 58007363 Tsu06g01134 06 10263683 10267793 PCT