Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01121 ATGAGCCGCTACGATCCAAACCCTTTCGAAGAAGAAGACCTTCACGTCAATCCCTTTTCGgaTGGAACAGCCAAAGGACAAGGGCCAAGTTATGGCGGTGGAGCATTTTACACTACCAACCCCGGAAGTGTTCCTTCTGCTACCTCAAGACTCTCACCCCTTCCTCCCGAGCCTTATGATCGTGGGGCAACTATTGACATACCTCTCGATAGCTCAAAGGATCTCAAAGCAAAGGAGAAGGAACTTCAAGCTAGAGAGGCTGAATTGAAAAAAAGGGAACAGGAACTAAAACGAAAAGAGGACGCTATAGCACGAGCCGGTATAATCatagaggaaaaaaattggCCACCTTTTTTCCCCATCATTCATCATGACATTGGAAAGGAAATACCAATCCATCTTCAAAGGATGCAGTATGTTGCGTTCGCAACATGGTTAGGTTTGGTTCTGTGTCTTTTGTGGAATATAGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATTTGGTTTCTCgctattatatattttatttctggTGCTCCAGGATCCTATGTAATGTGGTATCGCCCCCTTTATCGCGCTATGAGGACAGACAGTGCTTTGAAGTTTGGCTGGTTCTTTGTCTCTTACATGTTGCACATTGTCTTCTGCATTTTTGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTTTGGCTGCGATTGATGTGATAGACGGCAGTGCATTGGTTGGGATATTCTACTTCATCGGGTTTGGATTTTTCTGTCTCGAGTCACTGATGAGCGTCTGGGTTTTTCAGCAAGTATTGATGTATTTCCGTGGAAGTGGCAAGGCTGCAGAGCTGAAGCGAGAGGCAGCCAGAGGGACAATGATGGCAGCTCTATAA 912 0.4375 MSRYDPNPFEEEDLHVNPFSDGTAKGQGPSYGGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATIDIPLDSSKDLKAKEKELQAREAELKKREQELKRKEDAIARAGIIIEEKNWPPFFPIIHHDIGKEIPIHLQRMQYVAFATWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVMWYRPLYRAMRTDSALKFGWFFVSYMLHIVFCIFAAVAPPIIFKGKSLTGILAAIDVIDGSALVGIFYFIGFGFFCLESLMSVWVFQQVLMYFRGSGKAAELKREAARGTMMAAL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01121 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 303 IPR007273 GO:0015031|GO:0016021
Tsu06g01121 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 303 - -
Tsu06g01121 303 Pfam SCAMP family 112 283 IPR007273 GO:0015031|GO:0016021
Tsu06g01121 303 Coils Coil 72 102 - -
Tsu06g01121 303 MobiDBLite consensus disorder prediction 1 65 - -
Tsu06g01121 303 MobiDBLite consensus disorder prediction 1 18 - -
Tsu06g01121 303 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01121 Tsu-Chr6 10153672 10160908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01121 3 303 Miscellaneous Gene Families AT1G11180 65.909 4.65e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01121 K19995 - gmx:100796729 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04914 02 58174233 58177982 Tsu06g01121 06 10153672 10160908 PCT