Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00760 ATGGAAATTCCTGAATCTGTTGTGGTGAACCGGATCGAACCCGGTTCAAAGGATAGCGGTTTAAGAGCTCAGATTGATACTTCGGCACCGTTTGAGTCTGTGAAAGAAGCCGTTACTCGATTCGGAGGTGTTGGTTACTGGAAACCTACTAACCTCATcactcctcctcctcctcctcagCAAAACATAGAAGAGCTTGATGCTGGAAAATTGGAGGAACAAGCAGTGATATTAGAGAAAGAGCTTATAATCAAAGAAAGGGAAACTCTTGATGTTTTAAAAGAGTTAGAAAGTACCAAAAAACTTGTCGAGAATCTGAAATCAAAGTTACAAGCAGAAGAATCTGATGCAAATTTGAATAGCAAGTTGAATTCATGTGATGATAAGGAaaatgagaaagaagaagaaaaggaaaaccaAGTTCGTCGTGTTCCTTCCAATTCGACAACTCCTGGTTTAATATTAAGAGAATTGAAGCAGGCGAAAATGAATCTAAACCGGACTACGAATGATATTGCTGATGTTCGAGTATCTGTTGAATCGCTCAACAAGAAActagagaaagaaagaatctCGCTAGAGAAAACACGTGAGAGGTTAACTCAAAACTCTTCAAAAATAACTTCTTTAGAGGAAGAGCTAAACCAAACAAGACTTAAACTGCAAGTCGTGAAAGACGGTGAAATCGAATGTGGTTCTGATGGACCTTCCGATATTACGGAAGAGCTTCAACGGTTGAGTTCTGAGGCAGAACATTTCAAGAAAATGGGAGAAGCTGCTAAATCAGAAGTATTGAGAGCTATGTCTGAGATTGAACAGACAAAAGGTATGATAAGAACATCGGAAATTAGGTTAGTTGCTGCTCGGAAAATGAAGGAAGCTGCTAGAGCAGCCGAAGCTGCTGCACTTGCTGAGATAAAAGCTTTATCTTATCTTGATGGAGATTGTGGTCAAATCCATGATGGAGTTACTCTTACCTTTGAAGAGTATAATGCTCTAACACGCAAAGCTCGAGATGCCGAGGAACAGTCTAAGAAAAGAGTTGTTGATGCTATGTTTCAAGTCGATGAAGCAAATGTATCCAAAATTGATGTATTAAAGAGGGTTGAGGAAGCTACATTAGAAGTTAATACAAGCAAGAAAGCACTTGAAGAAGCTTTAGAAAGGGTAGAGGCTGCAAATAGAGGAAAGTTAATGGTTGAAGAGGCTTTAAGAAAATGGCGATCGGAGGGTAACAAAAGACGATCATCGATGCATAATAATAACTCTACGAAGTTTAAAAACCCTTCTCACTATCGGAGAGATTCTCGGTTATTCGATGTAAATGGAATGAATCAAGTTGATGGTGAGGTCAAACCGGTTCTTAAGCCGACTCTATCAATAGGACAAATATTGAGTCGGAAATTGATGATGCCGGACGAGTTTGAAGGTGGGATGATTATAGAAAGAGGTTCGATGAAACGAAAAGTATCTTTAGGTCAGATGCTTGGTAAACAAAACTATGATCCATCTTTTGAATTTGATAGACAAGCTGAGAAAGAAAATGGTCAGAAGCAGTTTTCTGCTAAGAGGAAGAAATTTGGATTTGACGCAGATTTCCCGCACATTGATTACCCTAACCTAACCTCCTCCCTAAAAGAAACTATGGAGGGGAAAGTAGGGCTTTTATTTCTTATTGTGTTAGGTGCTGCTTCTGCTTGTCATGCAAGAGGCATACTAAACCTTGAATTATACGGTAAATCAAATGCGTGTACAATTTGCGAGGAATATACAACTGAGGTACTTGATTATCTTAAGGATAACAAGACTCATGTAGAGATCCTTGATTCCCTTCACGATACTTGTCaacatcttctttcttttaacgAGCAGTGCATCAGTTTGGTGGATTATTATGTTCCACTTTTCTTCTCAGAAATAGCTCGAATTAATTCCGGAGAACTTTGTGAGAAGTTCAATCTTTGCGAGTCTGCAAAGAATTATTCAAGAGTTGGAGGAGGAAATAGCTGCGGCTTTTGCAAAGACACTGTTGCACAATTATTGGTTGAGTTGAATGATCCCGACACTAAGCTTGAGATAATGGAGAAACTATTGAAGGCTTGCAATTCTCTGGAGAAGCACACAAAGGAGTGCAAGAGGATGGTTTTCGAGTATGGACCTTTGATTCTAATCAATGCAGAGAAGTTCCTAAAGACAAATGACATATGCACTACAATACATGCCTGCCCTACTTCCTCTATTGTTAGCCAGGAAACTACCATCATTGAAGAAACAATGCTTTCTGACTCTTAA 2292 0.3765 MEIPESVVVNRIEPGSKDSGLRAQIDTSAPFESVKEAVTRFGGVGYWKPTNLITPPPPPQQNIEELDAGKLEEQAVILEKELIIKERETLDVLKELESTKKLVENLKSKLQAEESDANLNSKLNSCDDKENEKEEEKENQVRRVPSNSTTPGLILRELKQAKMNLNRTTNDIADVRVSVESLNKKLEKERISLEKTRERLTQNSSKITSLEEELNQTRLKLQVVKDGEIECGSDGPSDITEELQRLSSEAEHFKKMGEAAKSEVLRAMSEIEQTKGMIRTSEIRLVAARKMKEAARAAEAAALAEIKALSYLDGDCGQIHDGVTLTFEEYNALTRKARDAEEQSKKRVVDAMFQVDEANVSKIDVLKRVEEATLEVNTSKKALEEALERVEAANRGKLMVEEALRKWRSEGNKRRSSMHNNNSTKFKNPSHYRRDSRLFDVNGMNQVDGEVKPVLKPTLSIGQILSRKLMMPDEFEGGMIIERGSMKRKVSLGQMLGKQNYDPSFEFDRQAEKENGQKQFSAKRKKFGFDADFPHIDYPNLTSSLKETMEGKVGLLFLIVLGAASACHARGILNLELYGKSNACTICEEYTTEVLDYLKDNKTHVEILDSLHDTCQHLLSFNEQCISLVDYYVPLFFSEIARINSGELCEKFNLCESAKNYSRVGGGNSCGFCKDTVAQLLVELNDPDTKLEIMEKLLKACNSLEKHTKECKRMVFEYGPLILINAEKFLKTNDICTTIHACPTSSIVSQETTIIEETMLSDS 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00760 763 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 16 534 - -
Tsu06g00760 763 Gene3D - 579 656 - -
Tsu06g00760 763 MobiDBLite consensus disorder prediction 114 151 - -
Tsu06g00760 763 Coils Coil 93 116 - -
Tsu06g00760 763 Coils Coil 68 88 - -
Tsu06g00760 763 MobiDBLite consensus disorder prediction 409 430 - -
Tsu06g00760 763 Coils Coil 119 139 - -
Tsu06g00760 763 PANTHER MYOSIN HEAVY CHAIN-LIKE 16 534 - -
Tsu06g00760 763 SUPERFAMILY Saposin 582 658 IPR011001 -
Tsu06g00760 763 Gene3D - 666 745 - -
Tsu06g00760 763 MobiDBLite consensus disorder prediction 123 142 - -
Tsu06g00760 763 SUPERFAMILY Saposin 667 744 IPR011001 -
Tsu06g00760 763 Coils Coil 369 389 - -
Tsu06g00760 763 Pfam Saposin-like type B, region 2 709 742 IPR008138 -
Tsu06g00760 763 Gene3D - 154 311 - -
Tsu06g00760 763 SMART sapb_4 668 742 IPR008139 -
Tsu06g00760 763 SMART sapb_4 582 655 IPR008139 -
Tsu06g00760 763 ProSiteProfiles Saposin B type domain profile. 666 746 IPR008139 -
Tsu06g00760 763 Coils Coil 165 227 - -
Tsu06g00760 763 Pfam Weak chloroplast movement under blue light 23 140 IPR008545 -
Tsu06g00760 763 Pfam Weak chloroplast movement under blue light 113 414 IPR008545 -
Tsu06g00760 763 Pfam Saposin-like type B, region 1 670 704 IPR007856 GO:0006629
Tsu06g00760 763 Pfam Saposin-like type B, region 1 583 618 IPR007856 GO:0006629
Tsu06g00760 763 ProSiteProfiles Saposin B type domain profile. 580 659 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00760 Tsu-Chr6 6773529 6781263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00760 - - aip:107639604 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00760 06 6773529 6781263 Tsu06g00760 06 6773529 6781263 ECH
Tsu04g01518 04 15907806 15922033 Tsu06g00760 06 6773529 6781263 PCT