Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00523 ATGGAAGGTGTGGATATGATTGAGAAAAATGAAGTTAACAGCAATGAAGGGAACATAGAATGTGAAAGTGGTAGTGAAGATGTggttttttctgttttgaatgAAGAAAAGGGTGTAGAGAGCAACTCTAGTAGTAGTGGTTTGGACTCATCTTCGTCGGTTCCTGAAGTTTCTGCATCTGATTGTACTAGTCCAGATGAAAGTGAAGTTGAAGAGAAAAAGGATTTgggttttgaaaattttgagaaaGAAATTTCTGTATTACCAGtGCTAGAGATTGAGATGATGAAGGAAAGGTTTTCAAAATTGTTACTTGGAGAAGATATGTCAGGTTCTGGAAATGGGGTCTCTACAGCATTGGCTATATCTAATGCCATAACTAATCTATGTGCCACTGTTTTTGGCCAACTTTGGAGATTGGAACCTCTTTCACATGAAAAGAAAGCAATGTGGCAAAGAGAGATGGAATGGCTTCTTTGTGTTAGTGATCATATTGTTGAATTCAAGCCTACTTGGCAAACATTTCCAGATGGTAGCAAGTTTGAGGTCATGACTTGTAGACCACGCTCAGATCTTTACATCAATCTTCCGGCTTTGAGAAAATTAGATAACATGCTTCTTGAAATACTAGATAGTTTTGTCAATACAGAGTTAAGGTATGTTGACCAAGGTGTTATGGCTCTAGAAGGAGATGGTTCATCTTCTTTCCAGAGACAAGAAGAGAAATGGTGGCTTCCTGTACCACAACTCCCTCCTTGTGGTCTCCATGAAAATTCAAGAAAGCAGTTGCAGCATAAGCGCGATTGCGCAAACCAAATATCAAAAGCTGCAATGGCTATTAACAATGCCACTTTGGCTGAAATGCAGGTTCCTGATACTTACTTAGAGTCTCTTCCAAAGACTGCAAGAACCAGCTTGGGGGATGTTATTTATAaatacattacatcagaaatttTTTCTCCTGAAAGTTTGCTAGCTAGTCTTGATATATCTTCTGAGCATGAAGCCATAAAGATTGCAAATAGAATAGAAGCTTCCATTTACATTTGGCATAAAAAGAGCAACTCAAAGCCTGTGAATCGTGCTACAAGATCAAGTTCAAGATCATCATGGGGAATGTTCAAGGATCTTATTGTTGAAGGAGACAAAAGTGAAATGTTGATAGAGAGAGGAGAAAGCCTTCTATTGTCTTTGAAGcaacatttcccttttctccCTCAAACAACATTAGATGTGACCAAAATTCAATGCAACAAGGATGTTGGAAAATCCATTCTAGAGAGCTATTCGCGAGTACTAGAGAGTTTGTCGTCCAATATTGTTGCGCGAATTGATGATGTGCTCTATGTAGATGACTTAACCAAACATTCTGATCAATTCCTATCTCTATCAAAAGTTGGTTTAATTACTGAAAAGGGTATTTCAGTTCCATATAATAAGGTTGTGACAAATTTTCTTAGCATTGGTAGCAAAGAAGACTATGGTTGTCCAATTGATGCAAAGTTGGGtccaaaattaaatacatttgaTGAAGTGCCAGAAGTTGAAACAGATATGGAATCAAGTGATTGCACTGAAGATTTGAAGATCAATTTAATGGATCAAGCATGGATAGAATGA 1620 0.3574 MEGVDMIEKNEVNSNEGNIECESGSEDVVFSVLNEEKGVESNSSSSGLDSSSSVPEVSASDCTSPDESEVEEKKDLGFENFEKEISVLPVLEIEMMKERFSKLLLGEDMSGSGNGVSTALAISNAITNLCATVFGQLWRLEPLSHEKKAMWQREMEWLLCVSDHIVEFKPTWQTFPDGSKFEVMTCRPRSDLYINLPALRKLDNMLLEILDSFVNTELRYVDQGVMALEGDGSSSFQRQEEKWWLPVPQLPPCGLHENSRKQLQHKRDCANQISKAAMAINNATLAEMQVPDTYLESLPKTARTSLGDVIYKYITSEIFSPESLLASLDISSEHEAIKIANRIEASIYIWHKKSNSKPVNRATRSSSRSSWGMFKDLIVEGDKSEMLIERGESLLLSLKQHFPFLPQTTLDVTKIQCNKDVGKSILESYSRVLESLSSNIVARIDDVLYVDDLTKHSDQFLSLSKVGLITEKGISVPYNKVVTNFLSIGSKEDYGCPIDAKLGPKLNTFDEVPEVETDMESSDCTEDLKINLMDQAWIE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00523 539 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 539 - -
Tsu06g00523 539 MobiDBLite consensus disorder prediction 36 64 - -
Tsu06g00523 539 Gene3D PRONE domain, subdomain 1 87 324 - -
Tsu06g00523 539 Gene3D PRONE domain, subdomain 1 325 461 - -
Tsu06g00523 539 MobiDBLite consensus disorder prediction 1 75 - -
Tsu06g00523 539 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 92 455 IPR005512 GO:0005085
Tsu06g00523 539 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 539 IPR038937 GO:0005085
Tsu06g00523 539 ProSiteProfiles PRONE domain profile. 83 461 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00523 Tsu-Chr6 4407918 4410896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00523 - - gmx:100800673 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01245 04 12574080 12577500 Tsu06g00523 06 4407918 4410896 PCT