Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00496 ATGGCATCATTCACAACAACCCTTTACTTCAAATCCttaattttcatcattttgttcaTAAAAGTCTTATCTTTTGACCCAAttcctttgttttcttttgctgattttgaaaaagatctGAAATTTAAGTCCAATGTTGCAATTTTTGGTAATGCTAAAATTGTCAATGGTGAGTCCAAGATTCAATTTTTTGGTTCAAGGAGTTCAAGTGGTGAAACTGGGAGAGTGATTTACAAGAAACCTATCAAGCTTTTTCAAGGTAAACCTAAGCAATTAGTTTCATTTTCAACTTACTTTACATTTTCAATCTCATTGGAAAATGGTGGTGGTTTAGCTTTTGTTATGATTCCAAATGGTGTTAATGGTGTTAAAGATGAGATTTTTAATCAAAGTTCATCTGGGTTTTCTCTTGGAttgaaaaataatgattttgaaGTTATTAGTGTTGAATTTGGTGCTTATAAGGATGgtaaaaatgagattttgatTAGAAATGGTGTTTCAAGTAAAGCTTACTTTACCAATTTGAAACTAAAAAGTGGTGAAAAATTGCATACTTGGATTGATTATGAAGCAAATTCAAGAAGGTTAGAAGTAAGATTAAGTAAACATGGAAATTCAAAGCCATTTGATCCATTGTTATGGCACAAAATCGATATATCGAATGTGTTAAAGGAGGAAGAGATGTTTGTAGGTTTTAGTCCTATGAAAGGGAAAAATGCTTATTTGTATTCATGGAGCTTTGTTATGAGACAATTTCCACCACATTCTATGCATTCAGAGCCACTTGATCCTAAGGTTTTTGCTAAAAACAGTGAAACTTCAATGGTTATTAAACCAAATGGTAAGAAAAAGAATGATTGTGTTTTAAGAGTTCTTGCTGCAATGATATTTGGGACTGGTTGTGGAGCATTGGCAGCATTCACTGTGCTTTATTTGTGGACAATCTTCGGCAATAAACGCGCTGCAGTGGTTCCAGAGGGATGTGTTATGCAATCTTTAGATGTTGATTATAGGAAAGTTAAAATTGTTGTAGATAATAAAACCATTGGAGATGGTAATAAGTAG 1068 0.3052 MASFTTTLYFKSLIFIILFIKVLSFDPIPLFSFADFEKDLKFKSNVAIFGNAKIVNGESKIQFFGSRSSSGETGRVIYKKPIKLFQGKPKQLVSFSTYFTFSISLENGGGLAFVMIPNGVNGVKDEIFNQSSSGFSLGLKNNDFEVISVEFGAYKDGKNEILIRNGVSSKAYFTNLKLKSGEKLHTWIDYEANSRRLEVRLSKHGNSKPFDPLLWHKIDISNVLKEEEMFVGFSPMKGKNAYLYSWSFVMRQFPPHSMHSEPLDPKVFAKNSETSMVIKPNGKKKNDCVLRVLAAMIFGTGCGALAAFTVLYLWTIFGNKRAAVVPEGCVMQSLDVDYRKVKIVVDNKTIGDGNK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00496 355 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 258 IPR013320 -
Tsu06g00496 355 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 355 - -
Tsu06g00496 355 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 355 - -
Tsu06g00496 355 Pfam Legume lectin domain 31 256 IPR001220 GO:0030246
Tsu06g00496 355 CDD lectin_legume_LecRK_Arcelin_ConA 31 248 IPR001220 GO:0030246
Tsu06g00496 355 Gene3D - 30 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00496 Tsu-Chr6 4183651 4185213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00496 50 234 Receptor kinase-like Gene Family AT5G03140 34.483 7.43e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00496 - - gmx:100810362 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01284 04 12976879 12978457 Tsu06g00496 06 4183651 4185213 PCT