Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01284 ATGGCAACATTATTCACTTCCCACCACTTCATTGCTTCTACTTTCCTCATCTTATTCCTCAAAATCCAATCTTTTGATCCTGTTTTATCCTTTAACTTCACAGATTTTGGAAAAGATCCAAATTTTAAGTCTATTGCAGGACTTTATCACAATGCAAAGGTTGTTAATGGTGGTTCTAAAGCTCTTCTTTCTGGGTCTGAGGATTCAGATAAATGGATAGTCAGGTACAAAAAACCCATCAGGATTGTTGATGTTGATGGTAAACCAAAGATGTTAGTCtcattttcaacttattttgaattttcaatGTCTTTGGGTGATGGGAATGGGTTGGCTTTTCTTATGACTGCAAAGgattttgatgaagatgatagtTCATCTGGGTTAGGGTTACCTTTTGATGTGAAGGTAAAGGAAGTTGCTGTTGAGTTTATTGCTTCAAGAGATGTTAGAAATAAGAGTTCTGCTAGTTTTAGTATGGCTATTAAGGTTGGTCATTTTCCGGCTAAAAAAATTGATGCCTCTTCTTTTAATATGGTTATAAGAAATGGTGGAAAGTTGTATGCTTGGATTGATTATCAAGCGAGTGAGAGGCGTTTGGAAGTTAGGTTGAGTCGATATGGTCACTCAAAGCCGGTTGATCCATTGCTACGGCAAACTGTTGATTTGTCAAATAATTGGAAAACTGAAGAGATGTTTGTTGCCCTTAATTCAATGAAAGGGAGACCTTCCTCTCAAGCATGTTTTCTCTATTCGTGGAGCTTTAATTTAAGGCCTTATCAACGATGGATGCATACTGAACCACTGGATCCGAAGGCTTTCTCTGCTAAGAACACACATAGTCCATCGGCAGAGAAGCCGAGGAGTGATTGTGTTTTAAAAGTTCTTGCTGCAATGATATTTGGTGCTGGATGTGGAGCATTGGCTGCATTCACCGCGCTTTATTTGTGGACGATGTTTGGTAATAGACGTCCTGTTGTTCCAGAGGAGTGTGTTATGCAGCCGGTAGATTGCGAGTACAAGAAAGTGAACATTGTTGTAGATAAACCCCTTAAAGATGCTAAGGAGTAG 1071 0.3782 MATLFTSHHFIASTFLILFLKIQSFDPVLSFNFTDFGKDPNFKSIAGLYHNAKVVNGGSKALLSGSEDSDKWIVRYKKPIRIVDVDGKPKMLVSFSTYFEFSMSLGDGNGLAFLMTAKDFDEDDSSSGLGLPFDVKVKEVAVEFIASRDVRNKSSASFSMAIKVGHFPAKKIDASSFNMVIRNGGKLYAWIDYQASERRLEVRLSRYGHSKPVDPLLRQTVDLSNNWKTEEMFVALNSMKGRPSSQACFLYSWSFNLRPYQRWMHTEPLDPKAFSAKNTHSPSAEKPRSDCVLKVLAAMIFGAGCGALAAFTALYLWTMFGNRRPVVPEECVMQPVDCEYKKVNIVVDKPLKDAKE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01284 356 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 355 - -
Tsu04g01284 356 Pfam Legume lectin domain 29 268 IPR001220 GO:0030246
Tsu04g01284 356 Gene3D - 27 257 - -
Tsu04g01284 356 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 355 - -
Tsu04g01284 356 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 260 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01284 Tsu-Chr4 12976879 12978457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01284 48 257 Receptor kinase-like Gene Family AT4G29050 29.310 7.26e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01284 - - lang:109325217 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01284 04 12976879 12978457 Tsu04g01284 04 12976879 12978457 ECH
Tsu04g01284 04 12976879 12978457 Tsu06g00496 06 4183651 4185213 PCT