Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00488 ATGGTTGCAGATTCCAACTCCAAATCCGACCTCTCCTTCGGTAGAATCTTTGCCAGCAGTGCTTTCTCCGCATGTTTCGCTGAGGTTTGTACCATACCTTTGGACACCGCCAAAGTTAGGCTTCAGCTTCAAAAGCAAGCTGTAGCTGGTGATGTCTCCTCTTTACCTAAATACAAGGGTATGCTGGGAACAGTTGGAACAATTGCCAGGGAAGAGGGTCTTTCAGCACTCTGGAAGGGTATCGTGCCGGGGCTACATCGTCAATGTTTGTATGGAGGATTAAGAATTGGGTTATATGAACCTGTTAAAACTTTCTACACGGGGAAGGACCATGTTGGCGATGTTCCACTGTCAAAGAAAATTGTAGCTGCATTTACGACTGGTGCTGTGGCAATTACAATAGCAAATCCAACTGATCTTGTCAAAGTAAGACTTCAAACAGAAGGAAAATTACCTCCGGGTGTTCCCAGGCGCTACTCTGGATCTTTAAATGCTTATTCATCAATCGTGAGACAGGAAGGAGTTGGAGCTCTATGGACAGGGCTTGGACCCAACATAGCAAGAAATGGTATTATCAATGCTGCTGAACTTGCCAGCTATGATCAAGTGAAACAGaCTATTTTGAAAATTCCAGGATTCACTGACAATGTTGTAACTCATCTCTTTGCTGGCCTTGGGGCAGGTTTTTTTGCTGTCTGTATCGGCTCACCAGTTGATGTGGTCAAGTCGAGAATGATGGGAGATTCTAGTTACAAAAGCACCCTTGATTGTTTTGTCAAAACCTTGAAGAATGATGGGCCCTTAGCATTTTATAAAGGGTTCCTCCCAAATTTTGGAAGGCTGGGATCTTGGAACGTGATCATGTTTCTAACCCTAGAACAGACTAAAAAGTTCGTCAAAAGTTTAGAATAA 912 0.4353 MVADSNSKSDLSFGRIFASSAFSACFAEVCTIPLDTAKVRLQLQKQAVAGDVSSLPKYKGMLGTVGTIAREEGLSALWKGIVPGLHRQCLYGGLRIGLYEPVKTFYTGKDHVGDVPLSKKIVAAFTTGAVAITIANPTDLVKVRLQTEGKLPPGVPRRYSGSLNAYSSIVRQEGVGALWTGLGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLFAGLGAGFFAVCIGSPVDVVKSRMMGDSSYKSTLDCFVKTLKNDGPLAFYKGFLPNFGRLGSWNVIMFLTLEQTKKFVKSLE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00488 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
Tsu06g00488 303 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 4 299 - -
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 PRINTS Mitochondrial brown fat uncoupling protein signature 287 303 IPR002030 GO:0006839|GO:0031966
Tsu06g00488 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Tsu06g00488 303 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
Tsu06g00488 303 Gene3D Mitochondrial carrier domain 15 302 IPR023395 -
Tsu06g00488 303 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 299 - -
Tsu06g00488 303 Pfam Mitochondrial carrier protein 216 300 IPR018108 -
Tsu06g00488 303 Pfam Mitochondrial carrier protein 10 108 IPR018108 -
Tsu06g00488 303 Pfam Mitochondrial carrier protein 114 209 IPR018108 -
Tsu06g00488 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00488 Tsu-Chr6 4137352 4141889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00488 8 303 Miscellaneous Gene Families AT3G54110 81.481 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00488 K15103 - gmx:100809667 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00488 06 4137352 4141889 Tsu06g00488 06 4137352 4141889 ECH
Tsu04g01300 04 13149937 13152614 Tsu06g00488 06 4137352 4141889 PCT