Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01300 ATGAGACAGGAAGGAATTGGAGCTCTTTGGACTGGCATTGGCCCCAATATCGCAAGAAATGCTATCATTAATGCTGCTGAACTAGCCAGCTATGATCAAGTGAAAGAgACCATTTTGAAAATTCCAGGATTCACGGATAATGTTGTCACACATCTTCTTTCTGGTCTCGGGGCAGGTTTCTTTGCAGTCTGCATTGGCTCCCCAGTTGACGTGGTTAAGTCAAGAATGATGGGAGATTCTAGTTACAAAAGCACCATTGATTGTTTCGTCAAAACATTGAAAAATGATGGACCTTTAGCCTTCTATAAGGGGTTCATACCGAATTTCGGACGGCTAGGATCTTGGAATGTGATCATGTTTTTAACACTAGAACAGACTAAAAAGTTCGTCAAAAAATTGGAATCAGCCTGA 411 0.4112 MRQEGIGALWTGIGPNIARNAIINAAELASYDQVKETILKIPGFTDNVVTHLLSGLGAGFFAVCIGSPVDVVKSRMMGDSSYKSTIDCFVKTLKNDGPLAFYKGFIPNFGRLGSWNVIMFLTLEQTKKFVKKLESA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01300 136 SUPERFAMILY Mitochondrial carrier 2 125 IPR023395 -
Tsu04g01300 136 ProSiteProfiles Solute carrier (Solcar) repeat profile. 46 129 IPR018108 -
Tsu04g01300 136 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 130 - -
Tsu04g01300 136 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 1 130 - -
Tsu04g01300 136 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 37 IPR018108 -
Tsu04g01300 136 Pfam Mitochondrial carrier protein 1 40 IPR018108 -
Tsu04g01300 136 Pfam Mitochondrial carrier protein 47 132 IPR018108 -
Tsu04g01300 136 Gene3D Mitochondrial carrier domain 1 135 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01300 Tsu-Chr4 13149937 13152614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01300 1 136 Miscellaneous Gene Families AT3G54110 86.861 2.32e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01300 K15103 - gmx:100809667 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01300 04 13149937 13152614 Tsu04g01300 04 13149937 13152614 ECH
Tsu04g01300 04 13149937 13152614 Tsu06g00488 06 4137352 4141889 PCT