Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00365 ATGTTGTCACAAAACCAAGCAGAGGAATCAATTCTTACAAGCCTCAATGAGACAGAACATGAAGGTAGTTCAAGTTTAGAAGATATAGGACAAGACCAATCCATGTTCAATTTCAAAAGCTTCTTATGGCATGGTGGTTCTGTTTGGGATGCATGGTTTAGTTGTGCTTCAAATCAAgtGGCTCAAGTGTTGTTGACATTGCCATATTCATTCTCTCAACTTGGTATGGTATCAGGTATTGTGTTTCAGATATTTTATGGTCTTGTTGGAAGCTGGACTGCTTATTTAATCAGTGTACTCTATGTTGAGTATCGTGCtagaaaggaaaaggaaaatgttgACTTCAAAAACCATGTCATTCAGTGGTTTGAAGTTCTTGATGGGTTACTAGGTAAATATTGGAAAATATTGGGGTTAGCCTTTAATTGTACTTTTCTTCTCTTTGGATCTGTCATACAACTTATAGCATGTGCAAGCAACATATATTacataaatgataaatttgataaaaGGACTTGGACTTATATTTTTGGAGCATGTTGTGCTACAACTGTGTTCATACCTTCATTCCACAATTACCGTATTTGGTCATTTCTTGGTCTTGGAATGACAACTTATACTGCTTGGTATCTAGCTATAGCTGCTATACTTAATGGCCAGATAGAAAATGTGGTACACTCTGGTCCAACAAAGCTAGTGTTATACTTCACAGGAGCCACTAACATACTTTACACGTTTGGTGGACATGCTGTGACTGTAGAGATTATGCACGCCATGTGGAAGCCTCAAAAGTTCAAGTACATATATTTTCTAGCAACTTTGTACGTTTTCACACTAACCATTCCATCCGCCGTTGCCGTTTATTGGGCTTTCGGCGACGAGTTGCTAAATCATTCCAACGCTTTCTCTCTTCTCCCCAAAACTAGATTCCGTGATGCCGCCGTTATCCTCATGCTCATTCATCAGAATGCTGTTGAGAAGCCTCCTTTCTTCCTAGCAAGTTGGACAGCTGTATATGTCTTGAATTCATTCATAGTTTTATGGATTTTAGTGGTTGGATTTGGGTTTGGAGGATGGGCCAGCATGATCaactttataaaacaaattgaCACATTTGGGATTTTTGCTAAATGCTACCAATGCCCAATACCACCCCAATCACCACCCCCTCATGCACATCATCAAAGTCGATATTACACAATCACCTCAACATAG 1215 0.377 MLSQNQAEESILTSLNETEHEGSSSLEDIGQDQSMFNFKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLVGSWTAYLISVLYVEYRARKEKENVDFKNHVIQWFEVLDGLLGKYWKILGLAFNCTFLLFGSVIQLIACASNIYYINDKFDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAILNGQIENVVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFLATLYVFTLTIPSAVAVYWAFGDELLNHSNAFSLLPKTRFRDAAVILMLIHQNAVEKPPFFLASWTAVYVLNSFIVLWILVVGFGFGGWASMINFIKQIDTFGIFAKCYQCPIPPQSPPPHAHHQSRYYTITST 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00365 404 Pfam Transmembrane amino acid transporter protein 44 322 IPR013057 -
Tsu06g00365 404 MobiDBLite consensus disorder prediction 1 25 - -
Tsu06g00365 404 MobiDBLite consensus disorder prediction 1 20 - -
Tsu06g00365 404 PANTHER AUXIN INFLUX TRANSPORTER 323 385 - -
Tsu06g00365 404 PANTHER OS05G0424000 PROTEIN-RELATED 323 385 - -
Tsu06g00365 404 PANTHER OS05G0424000 PROTEIN-RELATED 2 322 - -
Tsu06g00365 404 PANTHER AUXIN INFLUX TRANSPORTER 2 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00365 Tsu-Chr6 3124598 3129735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00365 5 322 Organic Solute Cotransporters AT2G38120 82.353 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00365 K13946 - gmx:100778463 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00365 06 3124598 3129735 Tsu06g00365 06 3124598 3129735 ECH
Tsu04g01335 04 13564383 13569420 Tsu06g00365 06 3124598 3129735 PCT