Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01335 atgttGCCACAGAAACAAGCAGAGGAAGCAATAGTGAGTAGCTTCAATGAAACAGATCAACAAGAAGGAGTAAttggaagagaagaagagaatgaACAAGATCATTCATTTAGCATCAAGAACATTCTTTGGCATGGTGGCTCTGTTTGGGATGCATGGTTTAGTTGTGCTTCAAATCAAGTGGCACAAGTGCTTTTGACACTACCATGTTCTTTCTCTCAACTCGGCATGCTATCAGGAGTTTTGCTTCAAGTTTTCTATGGAATTCTTGGAAGTTGGACTGCTTATATTATCAGTGTTCTCTATATTGAGTACCGCactagaaaagaaaaagaaaatgttaattTCAAGAATCATGTTATTCAGTGGTTTGAAGTGCTTGATGGGTTGTTGGGTCCATATTGGAAAGCATTGGGGCTAGCTTTCAATTGTACTTTCCTTCTCTTTGGATCTGTGATTCAGCTTATAGCTTGTGCAAGCAACATCTACTACATAAATGACAACTTGGACAAAAGAACTTGGACATATATCTTTGGAGCTTGTTGTGCTACAACTGTGTTCATACCTTCCTTCCACAATTACCGTATTTGGTCTTTCCTTGGACTTGGAATGACAACTTACACAGCTTGGTATCTCACCATTGCAGCTCTTGTTCATGGCCAGGCAGAAAATGTGACACATACTGGTCCAAAGAAATTAGTGTTGTACTTCACTGGAGCAACAAATATACTATACACATTTGGTGGACATGCTGTTACTGTAGAGATTATGCATGCCATGTGGAAGCCACAAAAATTCAAGTACATATATTTGATGGCAACTTTATATGTTTTCACATTAACAATTCCTTCAGCTACTGCTGTTTATTGGGCCTTTGGTGATCAACTTCTTAACCATTCCAATGCTTTCTCTCTCCTCCCTAAAAATGGATTTAGAGATGCAGCTGTTATACTTATGCTCATTCACcagTTTATCACATTTGGTTTTGCGTGTACTCCATTGTACTTTGTATGGGAGAAAGTAATTGGAATGCATGACACAAAAAGCATTTGTCTAAGGGCACTAGCAAGGTTACCAGTGGTTATACCTATTTGGTTCTTAGCTATTATTTTCCCTTTCTTTGGACCCATTAATTCTGCTGTTGGTGCTCTTCTTGTTAGTTTCACTGTTTACATCATTCCTTCCGCCGCTCATATGCTCACTTATCGAAAAGCCACTGCGCGACAGGTAATTCTGTTAATTCATCGTCAATCCTAA 1257 0.3747 MLPQKQAEEAIVSSFNETDQQEGVIGREEENEQDHSFSIKNILWHGGSVWDAWFSCASNQVAQVLLTLPCSFSQLGMLSGVLLQVFYGILGSWTAYIISVLYIEYRTRKEKENVNFKNHVIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQAENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSATAVYWAFGDQLLNHSNAFSLLPKNGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSAAHMLTYRKATARQVILLIHRQS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01335 418 PANTHER OS05G0424000 PROTEIN-RELATED 2 409 - -
Tsu04g01335 418 PANTHER AUXIN INFLUX TRANSPORTER 2 409 - -
Tsu04g01335 418 Pfam Transmembrane amino acid transporter protein 45 408 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01335 Tsu-Chr4 13564383 13569420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01335 5 409 Organic Solute Cotransporters AT2G38120 85.995 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01335 K13946 - gmx:100778756 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01335 04 13564383 13569420 Tsu04g01335 04 13564383 13569420 ECH
Tsu04g01335 04 13564383 13569420 Tsu06g00365 06 3124598 3129735 PCT