Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00362 ATGGGAGATGAGGTCATGGTTGTGACAACACACGAAGGAGTTCCGAAGGAATTTTATGGAGCACAGTTAATCGGATCCAAGAGCTTCCCTTTTCCTTGGTATCAGAAGGTACCACTCTCTTTGGCACTTAGTCCAAGAATAATTTCAGCAGTTGCTCAGTTTAAGCCTGATATAATTCATGCATCGTCACCTGGCATAATGGTCTTTGGTGCTCTTATCATTGCAAAGCTTCTTTCTGTTCCTATTGTCATGTCCTATCATACTCATGTGCCAGTaTACATTCCTAGATACACATTTAGTTGGCTAGTGCAACCGATGTGGTTGGTTCTAAAGTTTCTGCACAGAGCCGCTGATCTAACTCTAGTGCCGTCGGTTGCCATTGGAAAGGATCTTGAAGAAGCTAGAGTAACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCCGAAAGTTTCAATCCTCGGTACAAGTCACATGAAATGCGATTAAGACTGAGCAATGGTGAACCGGACAAGCCCTTGGTTGTTCATGTTGGACGTCTCGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTGTCATGGATAGGCTTCCTGAAGCACGGATCGCTATTATTGGAGATGGACCCTACAGGGAGGAGCTTGAGAAATTGTTGGAAGGCCTGCCTGCAGTATTCACAGGAATGTTAAGTGGGGAAGAATTATCTCAAGCGTATGCTAGTGGCGATGTCTTCATTATGCCGTCAGAGTCCGAGACACTTGGTCAAGTTGTCTTGGAGGCCCTGTCTTCAGGGATTCCTGTCGTGGGAGCACGTGCCGGTGGAATCCCAGACATAATTCCCGAAGATCAAGACGGGAAAATTGGATATCTCTACACTCCAGGTGATCTCGAAGATTGCTTGAGCAAACTAAAACCACTGTTGCATGACATAGAGTTGAGAGAAACGATGGGAAAAGCCGCGCGTATAGAGATGGAAAAGTATGATTGGAGGGAAGCTACTAAAACGATACGTAACCAAAATTACAATACTGCTATTTGGTTCTGGCGCAAGAAAAAGGCTCAACTATTGTTACCATTCCAATGGCTAGCGAAACATATTTTCCCGTCTCCCGAAGTCGTATAG 1128 0.4459 MGDEVMVVTTHEGVPKEFYGAQLIGSKSFPFPWYQKVPLSLALSPRIISAVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWLVLKFLHRAADLTLVPSVAIGKDLEEARVTAANKIRLWNKGVDSESFNPRYKSHEMRLRLSNGEPDKPLVVHVGRLGVEKSLDFLKSVMDRLPEARIAIIGDGPYREELEKLLEGLPAVFTGMLSGEELSQAYASGDVFIMPSESETLGQVVLEALSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLHDIELRETMGKAARIEMEKYDWREATKTIRNQNYNTAIWFWRKKKAQLLLPFQWLAKHIFPSPEVV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00362 375 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 1 374 - -
Tsu06g00362 375 Pfam Glycosyl transferases group 1 172 323 IPR001296 GO:0016757
Tsu06g00362 375 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 338 - -
Tsu06g00362 375 Gene3D Glycogen Phosphorylase B; 149 329 - -
Tsu06g00362 375 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 1 374 - -
Tsu06g00362 375 CDD GT4-like 1 335 - -
Tsu06g00362 375 Pfam Glycosyltransferase Family 4 2 152 IPR028098 -
Tsu06g00362 375 Gene3D Glycogen Phosphorylase B; 2 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00362 Tsu-Chr6 3069013 3073653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00362 1 292 Glycosyltransferase AT5G01220 81.164 2.83e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00362 K06119 - gmx:100780899 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00362 06 3069013 3073653 Tsu06g00362 06 3069013 3073653 ECH
Tsu04g01329 04 13475250 13480572 Tsu06g00362 06 3069013 3073653 PCT