Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00344 atgcaTCACAATATTTTAACTACAATGCGTAGTTTAAAGATCATGGATGGTTGCAAAGGTTCTCAGGTTTATGCTGTCCACCGTCATTCTTCTGGTGGAGGAAGCGGTGGAATTGGTGAAAAGCTTCTTCAACAGCTTCATGATCATATTAAAAATCAAACCTTTAGAACCAAATCGGTTAAAAATCAAACCTTCCAACCGCCGCCGAATCAGACACCGAATCAAACACCGTCTGAGGTTGTTGCTGAGGGTTCTCTTTTGCCTTATGGACTTCCTATGACAGACCTTCTTGAGCCGAAAATTGAGCCGTTCTTAAGGCCGGTTGATTTTGTCGAAAGGTTAGCTGAATTGCATAATAAGATTGAGAATTGTTTGGAGGTTGATAGGTCTGAGGTTTATTTGGAACATAGTTCGGTTTTTAGGGGATTATCCGATGGGAAATTGTTTCGCAGGAGTTTGAAGTCAGCACGACAACATGCTGTGGATGTCCACAGCAAAGTCGTGCTGGCCTCGTGGCTTAGGTATGAGAGGAGGGAGGACGAGATGATTGGCTCGTCCTCGATGGGTTGTTGTGGAAGGAATATTGAATGCCCTAAGGCTACATTGGTGGCAAATGGGTATGATCCTGAATTGGTTTATGATAGTTGTTGCTGTCGTCGTGATCGTGAGGGTGAGGAGGATTTAATGACATCAGTTGTTGATGATCAAGAATGCTCTACCTCGGATGAGGATGATGGAGGTGGGGATATGTCGTTTTGTATTGGTGATGATGAAATTAGGTGTCGTAGGTTCAATATGGCTTCGCTTTCGGGGCCGTTTAAGACAATGTTATATGGTGAATTCATAGAATCAAGGAGGGAGAAGATAAATTTTTCGAAGAATGAGATTTCTGTTGAGGCAATGAGGGCTGCCGAGGTTTTTAGTAGGACAAAAAGTTTGAGCACGATCAAACCTAATGTGGTTTTGGAGTTGCTATCTTTGGCGAACCGGTTTTGTTGCGAGGAGATGAAGTGTGCTTGTGACGGGCATTTGGCATTGTTGGTTTGTGACATGGATGATGCCTCATTGCTCATTGAGTATGGACTTGAGGAGACTGCATATCTTTTGGTCGCAGCCTGCTTGCAGGTGTTTCTGCGGGAGCTACCTGCTTCGATGGAGTGTACAAGTTTTGCGAAATTGTTTTGTAATCAAGAGGGCAGGGATAGGCTTGCTACGACAGGGCATGCGTCGTTTGTGTTGTATCATTTCTTGAGTCAAGTTTCCATGGAGGAGGAGATGCGGTCGAACACAACCGTGATGCTGTTGGAGAGATTAGTAGAGTGCGCTAAAGATGGGTGGGAGAAGCAACTAGCATATCACCAATTAGGTGTTGTTATGTTTGAGAGAAAAGAATACAAAGATGCACAACATTGGTTCGAGGCAGCAGTGGAGGCAGGCCACATTTATTCGTTAGTTGGAGTTGCAAGGGCAAAATATAAACGAGGTCATACATATTCGGCGTATAAGCTGATGAACTCCCTTATTAATGATTATAAACCTGTTGGTTGGATGTATCAGGAAAGGTCTTTGTATTGTATTGGGAAGGAAAAAAAGATGGACTTGATCTCAGCGACCGAATTAGATCCTACGCTTTTGTTTCCTTATAAATTCCGAGCTGTTGCTTTGCTTGAGGAGAACAGGATTGGACCTGCTATTGcagaaataaacaaaatactTGGTTTCAAAGTTTCTCCTGACTGCCTTGAATTGAGGGCTTGGTTCTTGATTGCCATGGAGGATTACGATGCAGCACTTAGAGATGTTCGGGCAATTTTAACATTGGACCCAGATTATATGATGTTCTACGGGAATATGAACGGTAATCACTTGGTAGAACAACTCAGTCCTGTTGTTCAGCAGTACAATCAGGCTGATTGCTGGATGCAATTGTACGACCGATGGTCCTCTGTCGATGATATTGGTTCATTGGCTGTTGTACACCAGATGTTAGAAAACGATCCAGGGAAAAGTCTTTTGCGTTTTCGGCAATCTCTCCTTTTGTTACGGATGGATATTGTATGA 2061 0.4294 MHHNILTTMRSLKIMDGCKGSQVYAVHRHSSGGGSGGIGEKLLQQLHDHIKNQTFRTKSVKNQTFQPPPNQTPNQTPSEVVAEGSLLPYGLPMTDLLEPKIEPFLRPVDFVERLAELHNKIENCLEVDRSEVYLEHSSVFRGLSDGKLFRRSLKSARQHAVDVHSKVVLASWLRYERREDEMIGSSSMGCCGRNIECPKATLVANGYDPELVYDSCCCRRDREGEEDLMTSVVDDQECSTSDEDDGGGDMSFCIGDDEIRCRRFNMASLSGPFKTMLYGEFIESRREKINFSKNEISVEAMRAAEVFSRTKSLSTIKPNVVLELLSLANRFCCEEMKCACDGHLALLVCDMDDASLLIEYGLEETAYLLVAACLQVFLRELPASMECTSFAKLFCNQEGRDRLATTGHASFVLYHFLSQVSMEEEMRSNTTVMLLERLVECAKDGWEKQLAYHQLGVVMFERKEYKDAQHWFEAAVEAGHIYSLVGVARAKYKRGHTYSAYKLMNSLINDYKPVGWMYQERSLYCIGKEKKMDLISATELDPTLLFPYKFRAVALLEENRIGPAIAEINKILGFKVSPDCLELRAWFLIAMEDYDAALRDVRAILTLDPDYMMFYGNMNGNHLVEQLSPVVQQYNQADCWMQLYDRWSSVDDIGSLAVVHQMLENDPGKSLLRFRQSLLLLRMDIV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00344 686 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 684 - -
Tsu06g00344 686 Gene3D Tetratricopeptide repeat domain 429 618 IPR011990 GO:0005515
Tsu06g00344 686 SUPERFAMILY TPR-like 450 615 IPR011990 GO:0005515
Tsu06g00344 686 SUPERFAMILY POZ domain 248 344 IPR011333 -
Tsu06g00344 686 MobiDBLite consensus disorder prediction 58 78 - -
Tsu06g00344 686 Gene3D Potassium Channel Kv1.1; Chain A 241 388 IPR011333 -
Tsu06g00344 686 PANTHER ETO1-RELATED 1 684 IPR044631 GO:0010105
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00344 Tsu-Chr6 2841526 2846776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00344 - - gmx:100799641 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00344 06 2841526 2846776 Tsu06g00344 06 2841526 2846776 ECH
Tsu04g01421 04 14639038 14644248 Tsu06g00344 06 2841526 2846776 PCT