Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00337 atggCTCTTTCTTGTTCCAAAGTTTCGATTTTTTCACCCTCACCTATCATGGGTCATGGTGCTAAAAATctcactttttcttcatcttctttgaatcTTTCTAAAGAAGGTGATAGAAAGAAGGATTTGAAGATGTTTGCTGCTTCTGCAAATGCACCAGCAACACTCACTGGTGTTATCTTTGAACCCTTTGAAGAAGTTAAGAAAGATGTTCTTGCTGTTCCTATTGCTCATAATGTTTCTTTGGCTCGTCAGAATTATCAAGATGAATCTGAATCTGCTATCAATGAACAGATTAATGTGGAATACAATGTTTCCTATGTGTACCACTCTTTGTTTGCATACTTTGACAGAGACAACGTAGCTCTCAAGGGACTTGCCAAGTTCTTTAAGGAATctagtgaagaagaaagagagcATGCTGAAAAGCTTATGAAATATCAGAATATTCGTGGTGGAAGAGTGGTGCTGTATCCTATTGTGAGTCCTCCCTCAGAATTTGATCATGTGGAAAAGGGAGATGCTTTGTATGGTGAGTCCTCTGTTTTTCCTCTGTTTTGA 561 0.3476 MALSCSKVSIFSPSPIMGHGAKNLTFSSSSLNLSKEGDRKKDLKMFAASANAPATLTGVIFEPFEEVKKDVLAVPIAHNVSLARQNYQDESESAINEQINVEYNVSYVYHSLFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLYPIVSPPSEFDHVEKGDALYGESSVFPLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00337 186 CDD Euk_Ferritin 89 177 - -
Tsu06g00337 186 SUPERFAMILY Ferritin-like 76 174 IPR009078 -
Tsu06g00337 186 Pfam Ferritin-like domain 93 170 IPR008331 GO:0008199
Tsu06g00337 186 ProSitePatterns Ferritin iron-binding regions signature 1. 136 154 IPR014034 -
Tsu06g00337 186 Gene3D - 54 181 IPR012347 -
Tsu06g00337 186 PANTHER FERRITIN-2, CHLOROPLASTIC 1 178 - -
Tsu06g00337 186 ProSiteProfiles Ferritin-like diiron domain profile. 85 186 IPR009040 -
Tsu06g00337 186 PANTHER FERRITIN 1 178 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00337 Tsu-Chr6 2806555 2809464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00337 K00522 - gmx:100778273 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00337 06 2806555 2809464 Tsu06g00337 06 2806555 2809464 ECH
Tsu04g01438 04 14854368 14857446 Tsu06g00337 06 2806555 2809464 PCT