Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01438 ATGgctctttcttcttcaaaagtTTCATCCTTTAATGGATTTTCTCTCTCACCCATTTCTGGGAATGATTTTAAAAAGCTAAATTTATCATCTTTTTGTAATTTGAGAGTTgacaagaaaagaagaagtgGAAAGTTTACGGTTTCTGCAGCAACAACGGTTCCTTTAACTGGGGTTATATTTGAACCGTTTGAAGAGGTTAAAAAGGATTATCTTGCTGTTCCAATTGTTCCTCAAGTTTCTTTGGCGAGACAGAATTTTGCTGATGAATGTGAATCTGTTATTAATGAGCAGATTAATGTGGAATACAATGTTTCCTATGTGTACCACTCCATGTTTGCATACTTTGATAGGGATAACGTGGCTCTCAAGGGATTTGCAAAGTTCTTCAAGGAATCTAGTGAAGAAGAGAGAGAACATGCAGAAAAGCTTATGAAATATCAGAACATTCGTGGCGGAAGAGTTGTACTTCACCCCATCAAGAATGTGCCGTCAGAATTTGAGCATGTCGAAAAAGGGGATGCATTGCATGCAATGGAATTAGCTTTGTCTTTGGAGAAGTTAACAAATGAGAAACTTCTGAATGTGCATAGTGTGGCAGACCGCAACAATGACCCTGAAATGACACACTTCATCGAAAGCGAGTTTTTGGCTGAACAGGTTGAAGCAATTAAGAAGATAGCAGAGTATGTGTCTCAATTGAGAAGGGTTGGAAAGGGTCATGGTGTTTGGCACTTTGATCAAAGACTTCTTCATGCTGCTTGA 765 0.3673 MALSSSKVSSFNGFSLSPISGNDFKKLNLSSFCNLRVDKKRRSGKFTVSAATTVPLTGVIFEPFEEVKKDYLAVPIVPQVSLARQNFADECESVINEQINVEYNVSYVYHSMFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIKNVPSEFEHVEKGDALHAMELALSLEKLTNEKLLNVHSVADRNNDPEMTHFIESEFLAEQVEAIKKIAEYVSQLRRVGKGHGVWHFDQRLLHAA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01438 254 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Tsu04g01438 254 ProSitePatterns Ferritin iron-binding regions signature 1. 136 154 IPR014034 -
Tsu04g01438 254 PANTHER FERRITIN-1, CHLOROPLASTIC 1 252 - -
Tsu04g01438 254 CDD Euk_Ferritin 89 248 - -
Tsu04g01438 254 PANTHER FERRITIN 1 252 IPR001519 GO:0006826|GO:0006879|GO:0008199
Tsu04g01438 254 Pfam Ferritin-like domain 95 237 IPR008331 GO:0008199
Tsu04g01438 254 ProSiteProfiles Ferritin-like diiron domain profile. 85 238 IPR009040 -
Tsu04g01438 254 SUPERFAMILY Ferritin-like 79 251 IPR009078 -
Tsu04g01438 254 Gene3D - 54 253 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01438 Tsu-Chr4 14854368 14857446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01438 K00522 - gmx:547824 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01438 04 14854368 14857446 Tsu04g01438 04 14854368 14857446 ECH
Tsu04g01438 04 14854368 14857446 Tsu06g00337 06 2806555 2809464 PCT