Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00324 ATGAGGAGAGAAAGGAAAACACAAACTTTTAATGCTAAAAGGACTCTACCTATCTCTCAAAAACTAGTGAACAGTTCACCATGGGGTAGAGATTTGAGGAAGAATCAATTGGGTGGTGTCATATTTGGATGCACAAGGACTACAATGAAAGAATGTCTATCTAAACAACATTTTGGCTTACCAGCTCCACACTTTTCCTATGTGAAGAACATAGAACCTGGGCTGCCTTTGTTTCTATTCAATTATTCTGATAGGAAGCTTCATGGAATTTTTGAGGCATCTAGCAAGGGAAAAATGTATATAGACCCTTATGCATGGATTAATGATGATTATTCCGATGAAACACAATATCCAGCACAGGTAAAAGTTCGTGTCAAACTTCAATGTCGTCCGTTGTCTGAAGATAAATTTGGACAAGTTATTGAAGAGAACTACTACGATAACAACCATTTTTGGTTTGAGCTAGATCATAGTCAAACAAACAGGCTAATGTATTTACTTACTTCTGCGGCAATAGCTCCTGGTACACCTGTACCACGATCTAATACGAAGTGGAGAAATGTATGTCCATCTTTTCCATCACGTGAAACTCTAAAGAAAGACGACCTTATGTGCGCAGTTGGTAGTACTATTACAAAAGAAAGATGGATCTCTATACAATCAAATTTTGAGAAGAAATTTGATCATGTTAAAATGGAACTCAACTGTTCGCATCATGCAAATGGTGAATATAATGGATTTGACAATTTGAAATATACTATTGGTGGCTTTGATGAATGTAAAATGGTTCAATATATGGAACTCTTTGATCCATGTCTTGAGGCAAGGATGGAGCTAATGAATTGTTATGTTGGGGATTTTTATGATGCTATTGATTTCAATGAGTCTACGGGACCAAAGGAGtcaaagtttttgaaaacattttag 927 0.356 MRRERKTQTFNAKRTLPISQKLVNSSPWGRDLRKNQLGGVIFGCTRTTMKECLSKQHFGLPAPHFSYVKNIEPGLPLFLFNYSDRKLHGIFEASSKGKMYIDPYAWINDDYSDETQYPAQVKVRVKLQCRPLSEDKFGQVIEENYYDNNHFWFELDHSQTNRLMYLLTSAAIAPGTPVPRSNTKWRNVCPSFPSRETLKKDDLMCAVGSTITKERWISIQSNFEKKFDHVKMELNCSHHANGEYNGFDNLKYTIGGFDECKMVQYMELFDPCLEARMELMNCYVGDFYDAIDFNESTGPKESKFLKTF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00324 308 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 1 219 - -
Tsu06g00324 308 PANTHER - 1 219 IPR044832 GO:0034976
Tsu06g00324 308 SMART dcd 35 169 IPR013989 -
Tsu06g00324 308 ProSiteProfiles DCD domain profile. 35 169 IPR013989 -
Tsu06g00324 308 Pfam Development and cell death domain 38 166 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00324 Tsu-Chr6 2654354 2656880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00324 - - mtr:MTR_1g018690 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00324 06 2654354 2656880 Tsu06g00324 06 2654354 2656880 ECH
Tsu04g01458 04 15063494 15070075 Tsu06g00324 06 2654354 2656880 PCT