Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01458 ATGATTCTCCTTGCTACGTCACTTTACTTCTCATTAGTTCTACCTCGGATCATGAATAGGAAGAAAACACCAATTTCTTCTTTAAATGGGAATCAGCTTTATTCTCCTAGTCCAAATCAATCCTTTGGAAGGAATTTGACAAAGGATGAACTTGGTGGTGTCATATTCGGGTGCAAGAATATGACGATCAAAGAATGTTTAACTAAACAACTATTTGGCTTACCTGCTGTACACTACTCTTATGTCAAGAACATTCATCCTGGGTTGCCTCTCTTCCTGTTCAACTATAGTGACAGGACGCTTCATGGAATTTTTGAGGCGGCGGGTAATGGAAGAATGTATATAGACCGCTATGGATGGACAACTGATGGTTCGGACGTGACACAGTTTCCTGCTCAGGTTCAAACCCGACTTCAATTACATTGCCGGCCACTAACTGAAGATAAGTTTAAACCTGTAATTGCCAAGAATTATTATGTTCATAACCATTTTTGGTTTGAACTTGACCATGCGCAAACAAACCAGCTGATCGCGTTACTGAAACCCTTGGCAATCGCCCCTGCTAAGTCTGTCCAACCCTTGGCATATCCCCCTGTTTATTCTGCTCCTGCTAATTCTGTTCCGCAAAATACAAATCAAGCAACTGTATCCCGACCTCTTCCATGGAATGATCCTTCTTGGAAATCTAAAACCTTTAAAATGCCCGAGTCAGAGTTAGAGGAGCATCATTCTACCCGCTCAAGTATGATATCAGGTTCCAATGACAGTGATTTATTAGATGAATGCTTTAAGCCATTGGATACTTTGGATACACGTTCAACTGATAAGGAGGAAGCAGCACAGAATGAGAAGGACCTCGTATGGATGAAACTAAAGGAATTGGCTGTTGCTCGTGAAAATCAGAATCTAAGTTGGGATAACAATGTAACTGATACTCCTTATGCAGATGAGAATTGGTCTGAAGGAAAGCATTCAGAGGAATTGGCTAGTTATAGTTATCCATCTGAGAAGGAGGAGAATTCCAGCTCTCCATTTGAGCATCAATTCGACATAGCTCAGTTGGTGCAAGAGATAAAAGCACTGGCGGATTTCAAAGCAACGCAAgctgaaaaaaataattacttagAGAAAAAGCTGATAGAGGCAGAATTGCAAATTCAGCTTCTAAAAGACCGTTGTGCACTGTTAGAATCTACGCGTGATATTCCTCCGACGAATGTTGAGGAGACAGTAATCAGTCCAACTGCTGAGCTGCATTTAGAGGCCAaagattcagtttttttaatAGGTGGCTCAGATGGAGAATCGTTGTTAGCAGCGATGGATATGTATTGTACTTCTCAGAATGTGATCAAATCTCTCAAGCCTATGAACTGTCACCGATCATATGCTTCAGTTGTAGAGTTGAATGGTTTGATTTATGTTTTCGGTGGTGGAGATGATATTGTTTGGTTTGACTCAGTCGAATCATATAACCCAATTTCTGATAACTGGACCTCGTGTCCCTCTATGAACCGAAAGAAAGGGAGCTTGTCTGGTGCTGCTTTGGATGGCAAAATATTTGCTGTTGGAGGTGGCAACGGTGCTGAGTCCTTCTCAGAAGTCGAGATGCTCGACTTTGACATTGGACGGTGGATTCCCACACGTTCAATGCTAGACAAGAGATTTGCTCTTGCGGCAGTGGAACTCAATGGTGCAATTTATGCTACTGGTGGATATGATGGAAATTACTATTTAAACTCTGCAGAAAGATTTGATCCTAGGGAACATGCTTGGTCCAAAATAgcaaacatgaatacaaaacgTGGCTGTCATTCATTAGTTGttctaaatgaaaaattGTACGCATTAGGCGGCTTTGATGGAGATACAATGGTTTCAAGTGTTGAAGTCTTTGATCCTCGTCTCGGGAAATGGATGACCGAGGAAACATCAATGAATCATTGTAGGGGGTATTTTGCTGCTGCAGTTGTTAAAGAATCCATATATGTGATCGGGGGTGCTAATAATGATTGTGAGACTATGCTAGATACAGTTGAGAATTACAAGGAAGGTAAAGGATGGAAGGAAGTTTATAAATCAAAAAATGTGAAGCGGTGTTTCATGTCAGCTATTGCCTGCAGCCATTAA 2130 0.4023 MILLATSLYFSLVLPRIMNRKKTPISSLNGNQLYSPSPNQSFGRNLTKDELGGVIFGCKNMTIKECLTKQLFGLPAVHYSYVKNIHPGLPLFLFNYSDRTLHGIFEAAGNGRMYIDRYGWTTDGSDVTQFPAQVQTRLQLHCRPLTEDKFKPVIAKNYYVHNHFWFELDHAQTNQLIALLKPLAIAPAKSVQPLAYPPVYSAPANSVPQNTNQATVSRPLPWNDPSWKSKTFKMPESELEEHHSTRSSMISGSNDSDLLDECFKPLDTLDTRSTDKEEAAQNEKDLVWMKLKELAVARENQNLSWDNNVTDTPYADENWSEGKHSEELASYSYPSEKEENSSSPFEHQFDIAQLVQEIKALADFKATQAEKNNYLEKKLIEAELQIQLLKDRCALLESTRDIPPTNVEETVISPTAELHLEAKDSVFLIGGSDGESLLAAMDMYCTSQNVIKSLKPMNCHRSYASVVELNGLIYVFGGGDDIVWFDSVESYNPISDNWTSCPSMNRKKGSLSGAALDGKIFAVGGGNGAESFSEVEMLDFDIGRWIPTRSMLDKRFALAAVELNGAIYATGGYDGNYYLNSAERFDPREHAWSKIANMNTKRGCHSLVVLNEKLYALGGFDGDTMVSSVEVFDPRLGKWMTEETSMNHCRGYFAAAVVKESIYVIGGANNDCETMLDTVENYKEGKGWKEVYKSKNVKRCFMSAIACSH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01458 709 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 32 707 - -
Tsu04g01458 709 PANTHER - 32 707 IPR044832 GO:0034976
Tsu04g01458 709 SUPERFAMILY Kelch motif 424 704 IPR015915 GO:0005515
Tsu04g01458 709 MobiDBLite consensus disorder prediction 234 253 - -
Tsu04g01458 709 MobiDBLite consensus disorder prediction 314 342 - -
Tsu04g01458 709 Pfam Kelch motif 602 640 IPR006652 GO:0005515
Tsu04g01458 709 Pfam Kelch motif 558 599 IPR006652 GO:0005515
Tsu04g01458 709 Pfam Kelch motif 513 551 IPR006652 GO:0005515
Tsu04g01458 709 Pfam Kelch motif 461 505 IPR006652 GO:0005515
Tsu04g01458 709 Coils Coil 372 399 - -
Tsu04g01458 709 Gene3D - 588 709 IPR015915 GO:0005515
Tsu04g01458 709 ProSiteProfiles DCD domain profile. 49 182 IPR013989 -
Tsu04g01458 709 Gene3D - 398 587 IPR015915 GO:0005515
Tsu04g01458 709 SMART kelc_smart 425 471 IPR006652 GO:0005515
Tsu04g01458 709 SMART kelc_smart 661 709 IPR006652 GO:0005515
Tsu04g01458 709 SMART kelc_smart 472 518 IPR006652 GO:0005515
Tsu04g01458 709 SMART kelc_smart 613 660 IPR006652 GO:0005515
Tsu04g01458 709 SMART kelc_smart 566 612 IPR006652 GO:0005515
Tsu04g01458 709 SMART kelc_smart 519 565 IPR006652 GO:0005515
Tsu04g01458 709 SMART dcd 49 182 IPR013989 -
Tsu04g01458 709 Pfam Development and cell death domain 52 179 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01458 Tsu-Chr4 15063494 15070075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01458 561 666 EF-hand Containing Proteins AT4G39560 29.730 6.49e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01458 - - cam:101507160 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01458 04 15063494 15070075 Tsu04g01458 04 15063494 15070075 ECH
Tsu04g01458 04 15063494 15070075 Tsu06g00324 06 2654354 2656880 PCT