Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00306 ATGCCTCTCTCGAAGTACCTTATAAGGAACGAGTACAGTTTAGCGGATCCCGAACTGTACCGTGCAGCTGACAAGGATGATCCTGAAGCTCTTCTCGAAGCTGTTGCTATGGCTGGTCTCGTTGGACTTCTACGCCAGCTCGGTGACCTTGCTGAGTTTGCTGCTGAGATCTTCCACGATTTACATGAAGAAGTAATGGCTACCGCTGCAAGAGGCCACAGTCTTACTGCTCGTGTTAAACAGCTTGAGTCTGAAGTTCCTTCACTTGAAAAGGCCTTTTTCTCTCAAACTCATCACTCATCATTCTTTACTAATGGAGGGATTGATTGGCATCCCAATCTTCAGTCTGAACAAAATCTTGTTACTCGTGGAAACTTTCCCCGATTGATAATGGATTCATATGAAGAATGCCGTGGTCCCCCAAGGCTGTTCCTTCTGGACAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAACGTTATACTGATCCATCGTTCTTTAAGATGGAGCCCACTTCATCGGCAGTAGCCACAGTACAAGTCCACAAGGAAAAGAGGATTCGTAAAGTCAAGCAGAAGAAAGGAGCACGAGTAAGGGATAATGAAGCTCCTAATGCTGTACCTACACATTCAAAATTACATCAGCTGCTTCTTGAGGAACGTATTGAGAATGGTTATAGTAATCCAGCGCGCCTAGTGAAGTTGAAGAGAAGACAATTGAATGGACCTGCTGTTGAAGCAAAAGCTGGGAAAAGTTACATGGAGAAATTTCTAGAAACTCCTTCACCTGATCCTAAAATGATTTATGAAACTTCAATCTTTCCGCTGCCTGTGAAACCGACATCAGATGATTCTAGCGAAGCAGGGATTAAAATTCTTGAAATCAGTAGCATCAGTCCTTTGAAAAAATCGATTGGAGATGAAAATACCTGTTCATATTCATCCCCTAATGAGCAGGAATTTGAACTAAACCAATTTCCAGAAGAGTTTGGTGAGACAAATGGAGATCTTGTGATGGTGAAAGAACAAATTCCAGTGGGTGTAGGAAATGAAAAGCCTTTTAATGATGTCAAGGTGTCTGATGAAACAGAATTGGCAATCAATgaacaaaagaaaatagaagGCAGCTTAGATAGGTACCATTCTGATGATGTGACTAGCGAGGTTGACAACTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACCGATGATGAGTATAAACCTAAGAAAAGCTTGAGTGTTCGAAAGGTAAGAGGcaccaataataaaaaacgtcAACTACAAGCTCAGTTTTCAGATTCTCAGTCATTGCTAGACTCATCAACGTCTGATGACAATAGCTCATTCAAACATCAGAGAAATGGGGAAGATATTGAAGTGAAAGCCCGGTTATCAGATTCTCACTCAACTGGAACCTCCTCGGCATCAGACAATCATAGCTCATTCAGGGGAGATGAAGATGAGCACGTGGAACTGCAAGCTCACTTATCAGATTCTCAATCTACTGGAAACTCCTCTACGTCAGATGTAAATAGTTCTTCCAAGAAAAGCAAATCTTATGTCCCTCATTATGAACCCGAAATTGAAGGCACACCATCCAACCAGCTTCCCAAAATCGTTGAATTTCAAAACACAGACCGTAGAAAGTTTGTCATGCGTGATGATGCACATGTTCATGAAGAAAAGGTTTCTGACTCTGGGAAAACATATCCTGATTTGTTGACTTCAGGAAAGGTGTCGTGTTCTGATCTTGAACCTACCAAACCAGTGACACTACCTGCAGCGACCCAGTCAGATGAAACCGTTTCTGACAATGTTGAACTTAATAGAAGATTAGGCAATGATGCGAACAGAGCAGGGCTTGTTGAATCTGTTGCTTCACAACCTTCATCTCCTTCCCTAATAAAAGATGATACTCTCGCGGTGGATTCTTCTGATAAAATTTCATTGGACAACTTAATTGGTGATGATCCACATATTCATTCTCGTGATCTGTTACAAGACTCACAAGAAGATTCCCTTTGCCCATCCATTGAAGAGTTAGACTTGAATTCAGGTCTTAATGTGGTGCTTGATCGTCAAGGCTCAAAAGATGAGGATTGTATTAATATTGCACCCCAACTTAATCCAACTGCTGTGAAGGTTCCTCCAGTGAGTTTCTTTACTGGCGAGCTAACTTCTGGTTTAACTCACAGTAATCCACAGGGTGAACAAGGTTCAACAGAAATTGAAGTTTCGTTCTCTGATCTTCAATCAAACTATGGAAATATACTAAAAATGGTGCATGGTGATGAAATAACTGGATCCTGCAGCAGTGTTGATCCAGTTGAAGGTGATGATGGTCATTCAAAAAATCCATCTTCTGAAGGTGATGATGGTCATTTTAAAAATCCATCTTCTCCTTATAATCATGTGATGGTAAATGATGATATCAGTGAAATTATTGAGTCAAAAGATCAACCTGTTCCTTCTGTTGATAGCACTGAAAATGATGAGGGTATCATTACTTGTCCAGCTTCAAGTGTGATTTGTTCTCCGTTAAGGAGCCTTTCAAATTTGGAACAACTAGACCCTGCTTCTTCAGTTTCTTATCAGACGGAATGCAGTGAAGTGGAACTGACTCATATTCCCATGGACACGAATACAGAGACGAGCGAGAATCAATTGGCACCATCGTTAGAGACAACATCATCCGAAATCATATATTCTCCAATGAGTAATCTTACAAAACTTGAAGAATCTCTTTCTACTTTTGCAAATTCAAATGAGAAAGAGACGGAAGTCCATGAGGCAGTTGCTAGAGAATCTTTGACAGAGCTAGAGGGACAGAAGATTGCGGGTCATCCAGAAATTGTTTCTGCAGATATACAAATGAACCTGAACAAATCGCTGCCCTGTGATCTTCAAGATTtggaaaataatattgaaaagtCATCTCCTAGGGAGCAAATCCAACAGAGTGCTGTTTTGGATGATGTGAAAATGGGGCCTGCCTTTTCTGGGTTTGACACTCTGCAGTCAGAATCTATGAGTTATGGCCAGAATGATCTTTTACAGAATGACAGAGATAGCTTTTCATCACCACCTTATAATAAGTTGGAGTCTCAAAATTATTTAGAGCCACACTTACAATCTCAAGTTGGTGAACAGCATGGAGAGTTTCCGCTCAAATATGAGGAAAACTTTGCCTCTGAGAAATCTCAATCTCAGCAGATGCAGATATATCAATTGGAGCAAGAAGGCACTCGTGCTACATCCGAATCTGTTTCAGAAAACCCTGCAgatgaatcatcatcatcatttcatTCTTCACCACAGTCATCTGGCTTGGAGATTAACCCAACCCAATATGTCACGGATCCATTGAAGCCTCTTCCTGACTTCTTTCCCAAGGCAACTGAAGACAAACTTGATGAGATGCCACCTATGCCTCCTCTACCCCCTATGCAATGGAGAATGGGCAAGGTTCAACATACTTCCCTAGATTCACATGAGGAGTTAGAAGTGCATCAGCCTTCTGTCCAATCAATGCAGCCAATTATGCCCGATAAGAAGTCTCAATTTGGTTTTCCAGCTTCTGATGGAGAGACCTTATTACATCAGAATCCATTTTTTCCTGTTGTGGCTTTGGGAAGTGATAAGCTTCAACATTCTTCTGGGTTTGTGGGTGTTTCAGGGCATCCTGTTGCTGTACCTTTTCAGTTTCCTATCATGGTTGATGAGACAAATGGACAGTATAATTACGTAGTGCTGGACAGGAACCAAATTCAAAACCCCTTTTTAACACTGCCCGTAGTACCTACAGCTGTGCATCCACCACGTGGTTACACTGTTCCTTCTGAGGGAGAAATGGCACAGAATTCAAACCCATATGCACCAACACTACCTGCTGCATATACTGTATCTGGACATCATTCCACATCTCCACAAGTGGAACCATTTCAATATCCAAGTCAATTAATGACAGAGACTAGTGCAGATGATAAAACACTTGAGCAGGCTACAGATAATGTAGTATCTAGGGATGGGCCTCCAAACAGTCATGTTATTGCTTCTGAGGGAGAATTGGTACATAATTCAAACCCGTTCCTTCCAATACCACCTGCCGAATGTGCTAATTCGGGACATGATTCCATCTCTCCTATAGAAACTCAATCTCCTAGTCAATTAACGGCAGAGACTAGTTCAGATGATACAACACCTCTGCAGCATATGAGTGATGTTGTATCTATGGACAGGCCTACACACAGTCACGCTGTCACTTCTGAGGAAGAAATGGTACAAAGTTCTAATCCGTGCCCTACTATACCATCTGATGAATCTGCTGTTTCAGAACATGATTCCATCTCTCCACAAGAAAAACCAACTCAACCTCCAAGTCAGTTACCAACGGAGACTAGTTCGGAAGTTAAAACACCTAATCATTCTGTAAGTAATGCAGAAGGGGCACAGGGACAATCGGGTATTTCACTCATGTTGCCACCAAATATGGAGTATGTGGATCCCAACCAGAGTTTCCGGCTCTTTGAGGGGGGAATGTCGTCATTGGATCCATCTGCTCAAACATCAGATTTTGACAGTGAAAGGACAAATGTAAAACCAAAACACAAAATTCCTCGTCCTCGAAATCCTCTGATTGATGCTGTTGCTGCTCACGACAAAAGCAAGCTTAGGAGGGCTACTGAACGGGTTATGCCTCAAATAGGACCAAAGGTAGATGAAAGAGATTCATGGTTGGAACAGATAAGAACAAAGTCCTTCAATTTGAAGCCTGCTGTGGCCACACGACCTAGAATTCAAGGTCCAAAAACAAATATGAAGCTTGCTGCTATCTTGGAGAAAGCTAATTCAATTCGCCAGGCTTTAGCTGgaagtgatgaagatgatgatgcaGATAGTTGGAGTGATTCTTGA 4923 0.4113 MPLSKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHSLTARVKQLESEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLQSEQNLVTRGNFPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMEPTSSAVATVQVHKEKRIRKVKQKKGARVRDNEAPNAVPTHSKLHQLLLEERIENGYSNPARLVKLKRRQLNGPAVEAKAGKSYMEKFLETPSPDPKMIYETSIFPLPVKPTSDDSSEAGIKILEISSISPLKKSIGDENTCSYSSPNEQEFELNQFPEEFGETNGDLVMVKEQIPVGVGNEKPFNDVKVSDETELAINEQKKIEGSLDRYHSDDVTSEVDNYMDALTTMESELETDDEYKPKKSLSVRKVRGTNNKKRQLQAQFSDSQSLLDSSTSDDNSSFKHQRNGEDIEVKARLSDSHSTGTSSASDNHSSFRGDEDEHVELQAHLSDSQSTGNSSTSDVNSSSKKSKSYVPHYEPEIEGTPSNQLPKIVEFQNTDRRKFVMRDDAHVHEEKVSDSGKTYPDLLTSGKVSCSDLEPTKPVTLPAATQSDETVSDNVELNRRLGNDANRAGLVESVASQPSSPSLIKDDTLAVDSSDKISLDNLIGDDPHIHSRDLLQDSQEDSLCPSIEELDLNSGLNVVLDRQGSKDEDCINIAPQLNPTAVKVPPVSFFTGELTSGLTHSNPQGEQGSTEIEVSFSDLQSNYGNILKMVHGDEITGSCSSVDPVEGDDGHSKNPSSEGDDGHFKNPSSPYNHVMVNDDISEIIESKDQPVPSVDSTENDEGIITCPASSVICSPLRSLSNLEQLDPASSVSYQTECSEVELTHIPMDTNTETSENQLAPSLETTSSEIIYSPMSNLTKLEESLSTFANSNEKETEVHEAVARESLTELEGQKIAGHPEIVSADIQMNLNKSLPCDLQDLENNIEKSSPREQIQQSAVLDDVKMGPAFSGFDTLQSESMSYGQNDLLQNDRDSFSSPPYNKLESQNYLEPHLQSQVGEQHGEFPLKYEENFASEKSQSQQMQIYQLEQEGTRATSESVSENPADESSSSFHSSPQSSGLEINPTQYVTDPLKPLPDFFPKATEDKLDEMPPMPPLPPMQWRMGKVQHTSLDSHEELEVHQPSVQSMQPIMPDKKSQFGFPASDGETLLHQNPFFPVVALGSDKLQHSSGFVGVSGHPVAVPFQFPIMVDETNGQYNYVVLDRNQIQNPFLTLPVVPTAVHPPRGYTVPSEGEMAQNSNPYAPTLPAAYTVSGHHSTSPQVEPFQYPSQLMTETSADDKTLEQATDNVVSRDGPPNSHVIASEGELVHNSNPFLPIPPAECANSGHDSISPIETQSPSQLTAETSSDDTTPLQHMSDVVSMDRPTHSHAVTSEEEMVQSSNPCPTIPSDESAVSEHDSISPQEKPTQPPSQLPTETSSEVKTPNHSVSNAEGAQGQSGISLMLPPNMEYVDPNQSFRLFEGGMSSLDPSAQTSDFDSERTNVKPKHKIPRPRNPLIDAVAAHDKSKLRRATERVMPQIGPKVDERDSWLEQIRTKSFNLKPAVATRPRIQGPKTNMKLAAILEKANSIRQALAGSDEDDDADSWSDS 1640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 483 497 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 452 467 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1380 1409 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1363 1497 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1424 1494 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 417 541 - -
Tsu06g00306 1640 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1344 1640 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 498 522 - -
Tsu06g00306 1640 PANTHER WASP-1 1344 1640 IPR028288 GO:0005856|GO:0030036
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 780 794 - -
Tsu06g00306 1640 PANTHER WASP-1 1 676 IPR028288 GO:0005856|GO:0030036
Tsu06g00306 1640 Gene3D - 1 90 - -
Tsu06g00306 1640 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 673 1330 - -
Tsu06g00306 1640 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 676 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1081 1118 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1081 1128 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 1518 1547 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 468 482 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 771 803 - -
Tsu06g00306 1640 MobiDBLite consensus disorder prediction 426 451 - -
Tsu06g00306 1640 Gene3D - 1544 1639 - -
Tsu06g00306 1640 Gene3D - 104 224 - -
Tsu06g00306 1640 PANTHER WASP-1 673 1330 IPR028288 GO:0005856|GO:0030036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00306 Tsu-Chr6 2503476 2511509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00306 - - cam:101510085 2343.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00306 06 2503476 2511509 Tsu06g00306 06 2503476 2511509 ECH
Tsu04g01493 04 15355078 15362591 Tsu06g00306 06 2503476 2511509 PCT