Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01493 ATGGATTCATATGAAGAGTGTCGTGCTCCACCTAGACTGTTTCTTCTAGACAAGTTTGATGTGGCTGGTGCTGGGGCATGTCTGAAGCGTTATACTGATCCATCATTCTTTAAAGCAGAGAATGCTTCCTCTGTAATGTCAACAGTAGAAGTTCACAGGGAAAGGAAAATTCGCAAAGTCAAGCAGAAAAAAGGAGAATGGCTGAGGGATGGTGAAGCCCCTGGAGTTGTGCCATCACATTCAAAACTTCATCAGTTGTTTCTTGAGGAGCATATTGAGAATGCCTGTAGTGATCCTGCTCGTcttgtgaatttgaaaaaaagacAATTGGATGGATCTGCAGTTGAATCAAAATCTGGGAGAAGCTACATGGAGAAATTTCTGGAAATGCCCTCACCTAATCATAAAATGGTCTGTGAAACGTCAGTCATTCAGCAGTCTGTGAAATCGATGTCAGACGACGAAACTGGGATTAAAATACTTGGAGTCAATGGCATTTCACCTATGGGAAGGTCTATGGAAAATGGAAAGACACATTCTTCGTCACATGAGCAAGAATTAGACTTGAATTCATGTGCAGAAATGGACAGGACGATAAATAGATATCTTGTGAAGGAGCCTGAACAAATCTTTTCTGGGGGGACTGGGACAGATGATATGTCTTCTAAGCATCTCAAGGTACCTGATGAAACCGAACTGGTGGAGGACGATGAACAAAATAGAAGAGAATGCAGCCCAAATGGCTACCATTCTGATGATGCAGCTAGTGAGGTTGATGATTATATGGATGCATTAGCTACCATAGACTCGGAGTTGGAAATAGACAATGAGTGTAGACCTAAGGAAAGCTTCCTTAATGTTCAAAAGGTAACTGGTTCAAATGGTGAAGAAGAACATCAACTGCAAGCTCAATTTTCAGATTCTCAATCATTTGGAGATTCGTCATTATCTGAGGAAATGAGTTTGTCTGAACCAGATAGAAGTGAGGAGCATAATGAAGTGCAAGCTCGACTGCCAGATTCTTGGTCAGAAGGAACGCCTGGTGCATCAGATGATAATAGTTCATTCAAAGGAGATAGAATCGAAGAGCATACCCATCTGCAAGTTCAGTTTTCAGATTCTCAATCTATTGGAAACTCCTCATCAGAGACTGAAAATATGTTATCCAACCAGCTTCCGCAAACTGTTGAATTGCAAAaaactggtggtgaatttgTCACAAATGATGATGCACATGATCAGGGGCGAGCAATATCTGATTCTAGACCAGTCTCTTCTGGTTCATGTCTGGATTCAGACTGTTTATTGTTGTATTCAGATCATGAACCTATAGCTACCTCACTAGTGTTCCTACCTACAAGGACTCAATCAGATGAAACACCGTATGTTCCTGTTGGATGTCATTTAAGATTGGAAGATGACAAAGATGCTCTCTCCCCAATAAAAGATAATACTTTCCCAGTTGTTTATTTTAACAACAATTCTTCGAACAACTTGGATGTTTCTGATCATCATGTCCATTCCAATACTCTGTTACACGTTTCGGATGAATTAAATTTAGCTCATGAAAGCAAATGTGGTGATCTTTCTCACATCGAAACAGTGCAGGCAGATTCTCTAAATGAGTACTGTTCTGAAAATTTATATCCTGCTGTGGAGTCTTCCGTGGACAATAGCTTTACAGAAGAACTGTGCTCTGATTTTACACACGGAAATCCACGAGATGGACCAGATTCGGCTGAATTTGAATTTCTGTATCCTGATCAGTTATCAAGGATAAATCTTGGCGATGAAATCAATGGATCCACCTGCAGTTTGGGTTCAGTTGAAGATGATAATCGTATTAAATATTCAGCTTCTCCTGATTACATACTGCAGGACGATGATGTCATGGTAAATGGTATGGTCCCTGTAGAAGTTCAGTCCAAAGATCTGGATGTATCTCTTCATAATGCTGAACCTGATGCAAGCATTGCTAATTGTCTAGCTTCAAATTCTATTTCTTCCCCATCAATGAATCCTTCAAATTTACACGAATCTTTACTAGGTTCTTCAGATTCCCATACAATGGAAATGGAATCCGACGAGGTAGAGTTGACAAAACATTTCACAGACTTGAATGCAGAGAAGGAAAGTCAACCGGAACCATTTTCATATATCACATCTCCAGTGAGTAGTCTTACAAAGTTGGAAGAATTTCCTACTTTTGAAGATCCTTAtgagaaaaatatgaaagtcGATGAGGAAGTTGCAAGAGATTCTTTGACAGAGTTAAAGTCACATATAGTAATGGGTCAACTGGAAATTGCTTCAACTGATGAACGGTTGAACCTGAACGGATCAGTTCCTTCTGACTCTAGTATAGGTAATAACTTTCAACATTCACTGCTTAAGGAGAAAATCCAAGATGGTTCTTCTCCCAATGACATGAAAATTGTGACCCAATGTTCAGAGCTAGACTCCCAGAGATCAGAATCTACATTTGTTTTCCAGATTGATCCACAGAACAGCAAAGATAGTTTTTCACCACCTTCCTATAATCAACTGCAGCCAGAAAACCATATTGAGTTTCCTTCTGAAGTCCATCCAGGGGAACCTTCACATGGTTCCTTATCAATGTCATCTGATCAAAAGATTAACCCAACAAAACATGTCATGGATTCATTGAAACCTCTACTTCCTGATCTTTTTCCCAGGGCAGCCAAAATCAATCTTGAGGAGACGCCACCTATGCCGCCTCTACCACCAATGCAATGGATAATGAGCAAGGTTCAAAATGCTTCCCCAGTTTCACAGAGAGAAGAAATATGTGTGAGTCAGGTATCATTCCAACCAATACAGCCCGTTACACCTGATTATAAGAGTCAATTTGATTTATCAACTTCTGAAAGAGTAACCTTTCCGTATCAGAATCCTTTTTTGCCTGTTGTGGATAGTAATGAAAGCCTACACCTTCCCGGGATATCAGCAGGTGTTTCAGAGCATCCTGTTGGTATTCCTTTGCAATACCCTGTGATGGTAAATGGAGCAAATGGTCAGTATAGTTACCTAGTTCAGGAGAGAAGCCAAATCCACAACCCTTTCTTAACATTACCCTTGCTATCTTATGGTGGACTTCCCCATGGATGTGTCATTGCTTCAGAGGGAGAAAGCATATTGAAATCAACTCCATGTCCACCAATACTACCTGCTGAATGTGCTGTTTATGGGTATAATCCCATCTATCAACAAGAAAAACTTTCTCAATTCACAAGTCAGTTAATGGAAGATACTGGATTAGAAGATAAAAAGGATAGTAATGGAGAGAGCGTATTGAGTTCAAGTCCATGGCCACCAATACTGCCTGCTGAATGTGCTGTTTATGGAGCTAATCCCATTTTTCAACAAGAAAAATCTTCTCAGTTTACAAGTCAGTTAATGGAAGATACAAGTTTAGAAGCTAAAAAGGATAGTAATCGAGAAAGCATATTGAATTCAAGTCCATGCCCACCAATACTGCCCTCTGAATGTGCTGTTCCTGGGTCTGATCCCATCTTTCAACAAGACAAACCGACCAAGTCTGCTAGCCAAATAATGGAAGATACAATTGAAGTTAAAAAGGATAGTCCTGGAGAATTGCATTCGGTGCTATCTGCTGAATGTCATGTATCTGAAGATCCTATTTCTCCAGAAGAGCAACATTCTCATTCTCCAAATCAATTAATGGAAGAGACTGTTTTAGAATTTACAACGCATGAGGAGTCATCTATTGATTTGGAAAGGGATCAAGGAGATCATTTAATCTCACCCGAGTCACCACCAAGTACAGAAGTTATGCAGCCCAATCACAGCCTGCTGCCTCCAGAGGGGGATCGGGAACTCTCATTGGATACATCTGCCCAATCATCAGAATTTGATAGTCACATACCGAATGGAAAACCAAAGAAGAatcttcttcctcctcctcctcagAACCATTTATTTGATGTTGCTGCTGCTCTTGACAAAAGCAGGCTGAGGAAGGTTAGTGATCGTGTTAGGCCCCAGATAGCACCAAAGGTAGATGATAGAGACTCATTGTTAGAACAGATTAGAACGAAGTCCTTCAACTTGAGGTCTGCTGTGGTTACACGGCCCAACATTCAGGGTCCGAAAACAAACTTGAGGGTTGCTGCCATCTTGGAAAAAGCAAATTCTATTCGCCAGGCATTGGCTGGAAGTGATGAAGACGATGATGCAGACAGTTGGAGTGATTCTTGA 4239 0.3987 MDSYEECRAPPRLFLLDKFDVAGAGACLKRYTDPSFFKAENASSVMSTVEVHRERKIRKVKQKKGEWLRDGEAPGVVPSHSKLHQLFLEEHIENACSDPARLVNLKKRQLDGSAVESKSGRSYMEKFLEMPSPNHKMVCETSVIQQSVKSMSDDETGIKILGVNGISPMGRSMENGKTHSSSHEQELDLNSCAEMDRTINRYLVKEPEQIFSGGTGTDDMSSKHLKVPDETELVEDDEQNRRECSPNGYHSDDAASEVDDYMDALATIDSELEIDNECRPKESFLNVQKVTGSNGEEEHQLQAQFSDSQSFGDSSLSEEMSLSEPDRSEEHNEVQARLPDSWSEGTPGASDDNSSFKGDRIEEHTHLQVQFSDSQSIGNSSSETENMLSNQLPQTVELQKTGGEFVTNDDAHDQGRAISDSRPVSSGSCLDSDCLLLYSDHEPIATSLVFLPTRTQSDETPYVPVGCHLRLEDDKDALSPIKDNTFPVVYFNNNSSNNLDVSDHHVHSNTLLHVSDELNLAHESKCGDLSHIETVQADSLNEYCSENLYPAVESSVDNSFTEELCSDFTHGNPRDGPDSAEFEFLYPDQLSRINLGDEINGSTCSLGSVEDDNRIKYSASPDYILQDDDVMVNGMVPVEVQSKDLDVSLHNAEPDASIANCLASNSISSPSMNPSNLHESLLGSSDSHTMEMESDEVELTKHFTDLNAEKESQPEPFSYITSPVSSLTKLEEFPTFEDPYEKNMKVDEEVARDSLTELKSHIVMGQLEIASTDERLNLNGSVPSDSSIGNNFQHSLLKEKIQDGSSPNDMKIVTQCSELDSQRSESTFVFQIDPQNSKDSFSPPSYNQLQPENHIEFPSEVHPGEPSHGSLSMSSDQKINPTKHVMDSLKPLLPDLFPRAAKINLEETPPMPPLPPMQWIMSKVQNASPVSQREEICVSQVSFQPIQPVTPDYKSQFDLSTSERVTFPYQNPFLPVVDSNESLHLPGISAGVSEHPVGIPLQYPVMVNGANGQYSYLVQERSQIHNPFLTLPLLSYGGLPHGCVIASEGESILKSTPCPPILPAECAVYGYNPIYQQEKLSQFTSQLMEDTGLEDKKDSNGESVLSSSPWPPILPAECAVYGANPIFQQEKSSQFTSQLMEDTSLEAKKDSNRESILNSSPCPPILPSECAVPGSDPIFQQDKPTKSASQIMEDTIEVKKDSPGELHSVLSAECHVSEDPISPEEQHSHSPNQLMEETVLEFTTHEESSIDLERDQGDHLISPESPPSTEVMQPNHSLLPPEGDRELSLDTSAQSSEFDSHIPNGKPKKNLLPPPPQNHLFDVAAALDKSRLRKVSDRVRPQIAPKVDDRDSLLEQIRTKSFNLRSAVVTRPNIQGPKTNLRVAAILEKANSIRQALAGSDEDDDADSWSDS 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01493 1412 PANTHER WASP-1 545 715 IPR028288 GO:0005856|GO:0030036
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 290 319 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 320 337 - -
Tsu04g01493 1412 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 545 715 - -
Tsu04g01493 1412 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 719 1102 - -
Tsu04g01493 1412 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1154 1412 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 1257 1317 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 405 426 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 290 389 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 856 878 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 368 389 - -
Tsu04g01493 1412 PANTHER WASP-1 1100 1154 IPR028288 GO:0005856|GO:0030036
Tsu04g01493 1412 PANTHER WASP-1 719 1102 IPR028288 GO:0005856|GO:0030036
Tsu04g01493 1412 PANTHER WASP-1 1 547 IPR028288 GO:0005856|GO:0030036
Tsu04g01493 1412 PANTHER WASP-1 1154 1412 IPR028288 GO:0005856|GO:0030036
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 229 256 - -
Tsu04g01493 1412 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1100 1154 - -
Tsu04g01493 1412 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 547 - -
Tsu04g01493 1412 Gene3D - 1 71 - -
Tsu04g01493 1412 Gene3D - 1314 1411 - -
Tsu04g01493 1412 MobiDBLite consensus disorder prediction 1146 1166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01493 Tsu-Chr4 15355078 15362591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01493 - - cam:101512913 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01493 04 15355078 15362591 Tsu04g01493 04 15355078 15362591 ECH
Tsu04g01493 04 15355078 15362591 Tsu06g00306 06 2503476 2511509 PCT