Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00257 atgggtgCTTCACTGCCTCCCAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCATATGAAACTAAGCAGTATAAAAAGGGGCTCAAGGCAGCTGatgctattttgaaaaaatttccaGACCATGGAGAAACTTTATCAATGAAGGGTTTAACATTAAATTGCCTGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGGTCAGACAGAGAATACAAGGAGGCAATCAAGTGCTACCGAAATGCATTGAGAATAGATCCTGACAATATTGAAATTCTGCGTGACTTATCACTCTTACAGGCTCAAATGAGAGAATTATCTGGCTTTGTTGAGACTAGACAACAACTTTTGACTCTTAAGCCAAATCATCGCATGAACTGGATTGGCTTTTCTGTTGCCCATCATTTAAACTCTAATGCGGCCAAGGCTGTGGAAATTTTGGAAGCATATGAAGGGACTTTAGAAAATGATCATCCTCCAGATAATGAACGTTGCGAGCATGGGGAAATGATTTTATATAAGATTTCTTTGTTAGAGGAATGCGGATTTCTTGATAGAGCTCTTGAAGAGTTCCgccaaaaagaaacaaaaattGTTGATAAACTTGCTTTTAAAGAACAAGAGGTTTCACTTCTAGTGAAGCTTGGTCATTTAGAAGAAGCAGAAACGTTATACAGGATATTACTTTCCATGAATCCTGATAATTATAGTTACTACGAGGGTCTCCAAAAGTGTGTTGGATTATATTTAGAAGATGGGAAGTACTCTGCTGATCAAATAGATCAGTTAGTTTCGTTGTATGAAACACTCGGGCAGCAATATAAGTGGTCTTCTGCAGTTAAGAGAATACCCCTGGATTTTTTACAAGGTGACAAATTTCGAGAAGCAGCAGAAAGTTATATTAGGCCTCTCTTAACTAAGGGAGTTCCATCTCTGTTTTCTGATCTTTCTTCTTTGTACAATCATCCTGGGAAGGCAGACATTCTGGAACAAATTATTCTTGAGTTAGAGCATTCAATTAGGACATCAAGCCAATATCCTGGGAGTACGGAGAAAGAATCCCCTTCAACTCATTTGTGGACTTTGTTTTTCTTGGCTCAGCATTATGACAGGCGCGGCCAATATGAGATTTCTCTTTCTAAAATCGATGAGGCTATAGAACACACACCTACTGTCATTGATCTATATTCTGCCAAGAGTCGGATATTGAAGCATGCTGGTGATTTGAATGCTGCTGCTGCATTTGCAGATGAAGCAAGGCGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAATAGCTGTGTTGTTCACCAAAGATGGGGATCAACATAACAACCTTCATGATATGCAATGCATGTGGTATGAGCTTGCCTCGGGTGAAAGCTTTTTCCGCCAGGGCAATCTTGGACGGGCTCTCAAGAAATTTTTAGCTGTGGAAAAGCATCATGCTGATATTACCGAGGACCAATTTGATTTTCATTCATATTGCTTAAGGAAAATGACTTTGCGTCCTTATGTTGAAATGCTTAAATTTCAAGACCAATTGCACTCACATGCATATTTTCATAAAGCCGCCGCAGGAGCTATCAGATCTTATATTAAGCTGCATGATTTTCCCCCAAAGTCTACAACAGAGGAAGATGAGCATATGTCAAATTTGCTCCCTtctcagaaaaagaaaatgcgACAAAAGCAAAGAAAGGCAGAAGCAAGAGCTAAGAAAgaGGCAGAAGAAAAGAATGAAGAGTTAAATTCTAGTGCGGTATCAAAGTCTGGGAAACGGAATGTAAAACCTGTTGATTCTGATCCACATGGGGAGAAGTTATTGCAGATCGAGGATCCTCTGTCCGAAGCTGCTAAATACTTGAAGTTGCTCCAGAAGAATTCACCCGATTCATTGGAAACACATTTGCTCTCTTTTGAATTATATACAAGAAAACGGAAAATTTTGCTTGCATTTCAGGCTGTAAAGCAGTTACTGAGGTTGGATGCTGACCACCCTGATTCTCACCGTTGCTTGATTAAATTTTTCCATCAATTGGGATCCATGAGTACTCCCGTGACTGAAAGCGAGAAACTGATATGGAGTGTCTTAGAAGCTGAGCGCCCAACTATTAGTCAGCTGCACGAGAAATCTCTTTTTGATGCAAACAATGCTTTCCTTGACAATCATAAAGATTCTTTGATGCATAGAGCAGCTTTTACGGAAATCTTGTACATTTTGGATTCTAACAAAAAATCTGAGGCTGTCAAGTTGATTGAAGAGTCGGCAAATAATATTGTGCCAAGAAATGGAGCAATCGGACCAATCGGAGAATGGAAACTTAAAGACTGTATTGCAGTTCACCAGCTTCTTGGAACTCTACTTGCTGACCAAGATGCGGCATTGAGGTGGAAAGTGCGTTGTGCAGAGTACTTCCCTTATTCAACGTACTTTGAGGGAAGGCACAGCTCTGCCTCTCCCAACTCAGCCTTCAACCAGTTACGTAAGAACTCTGAAAAAGATAGTCCTAATCATTCAGTTGGTAATCAAAATGTGGTCTCCACCACATCAAACGGGAAATCATTTGAAAATCTCACTATCTGA 2700 0.3915 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCLDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYKEAIKCYRNALRIDPDNIEILRDLSLLQAQMRELSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNAAKAVEILEAYEGTLENDHPPDNERCEHGEMILYKISLLEECGFLDRALEEFRQKETKIVDKLAFKEQEVSLLVKLGHLEEAETLYRILLSMNPDNYSYYEGLQKCVGLYLEDGKYSADQIDQLVSLYETLGQQYKWSSAVKRIPLDFLQGDKFREAAESYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQIILELEHSIRTSSQYPGSTEKESPSTHLWTLFFLAQHYDRRGQYEISLSKIDEAIEHTPTVIDLYSAKSRILKHAGDLNAAAAFADEARRMDLADRYVNSECVKRMLQADQVALAEKIAVLFTKDGDQHNNLHDMQCMWYELASGESFFRQGNLGRALKKFLAVEKHHADITEDQFDFHSYCLRKMTLRPYVEMLKFQDQLHSHAYFHKAAAGAIRSYIKLHDFPPKSTTEEDEHMSNLLPSQKKKMRQKQRKAEARAKKEAEEKNEELNSSAVSKSGKRNVKPVDSDPHGEKLLQIEDPLSEAAKYLKLLQKNSPDSLETHLLSFELYTRKRKILLAFQAVKQLLRLDADHPDSHRCLIKFFHQLGSMSTPVTESEKLIWSVLEAERPTISQLHEKSLFDANNAFLDNHKDSLMHRAAFTEILYILDSNKKSEAVKLIEESANNIVPRNGAIGPIGEWKLKDCIAVHQLLGTLLADQDAALRWKVRCAEYFPYSTYFEGRHSSASPNSAFNQLRKNSEKDSPNHSVGNQNVVSTTSNGKSFENLTI 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00257 899 PANTHER BNAC02G23120D PROTEIN 10 875 - -
Tsu06g00257 899 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Tsu06g00257 899 Coils Coil 596 631 - -
Tsu06g00257 899 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Tsu06g00257 899 Pfam TPR repeat 84 123 - -
Tsu06g00257 899 MobiDBLite consensus disorder prediction 578 593 - -
Tsu06g00257 899 Gene3D - 505 725 - -
Tsu06g00257 899 Gene3D - 2 503 - -
Tsu06g00257 899 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Tsu06g00257 899 SMART tpr_5 380 413 IPR019734 GO:0005515
Tsu06g00257 899 SMART tpr_5 77 110 IPR019734 GO:0005515
Tsu06g00257 899 SMART tpr_5 43 76 IPR019734 GO:0005515
Tsu06g00257 899 MobiDBLite consensus disorder prediction 854 899 - -
Tsu06g00257 899 MobiDBLite consensus disorder prediction 578 644 - -
Tsu06g00257 899 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 875 - -
Tsu06g00257 899 SUPERFAMILY TPR-like 233 454 IPR011990 GO:0005515
Tsu06g00257 899 MobiDBLite consensus disorder prediction 606 622 - -
Tsu06g00257 899 PIRSF NAT_A 1 818 IPR021183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00257 Tsu-Chr6 2121567 2138597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00257 K20792 - gmx:100820094 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00257 06 2121567 2138597 Tsu06g00257 06 2121567 2138597 ECH
Tsu02g05498 02 63303145 63313586 Tsu06g00257 06 2121567 2138597 PCT