Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00238 ATGGCGAAGGGAGGACAATGCTTGTTCGAGAAGGTTCGGAGGTGTATTCGGACGGTTTTCTTTGTTATTGCATTGGTTGTTTCGCTTATTGTTACGTCGCTTCCGGTGGTTGTTGCGGTGGTGGATATTCTTGTTCCGTTTGTTTTGATCTCAAATTTTACTTGTGTTAAATGCTATAGTTTCAAACAGCATTTTCACCGTTACTCTTTCAAGAGTTCTTTGATGGATATTCCTCTTGTTTCACTCTTAAGATCCTTCATCATTATCTGTGTTTATTCAATTTGTGATGGTCCTGCTCTTTCACACGGTCCTTACCTCGGAACTGTGACTCTGTGTTCGTTTTCCTCAATTGTTCTCCTTTCAGTCAAAGCTTGTGTTTTCACTGTAAATTCACAGATTGAAGCTGAAGCTTCAGTAGCTTCTCTAAAAAGGCAGAGACTCCATTTGAAGAAGTCATGGGGAATGCCTGTGTTGTTTCTTTCGTCGGTTGTGTTTGCTCTTGGCCATACTGTTGTTGCTTATAGAACCAGCTGCAGAGCACGGAGGAAGCTCTTGTTTCATCGCGTTGACCCCGAATCTGTCCTATCATGCAAAAGTGTTTTCTCTGGCTATCCAAAGGTCCCTCGCTCTCCTACTCCTTCTGGGGGAAGAACCCCAAAAAGTGACAGTGAAATGAGGCGGAGACCTTTTGGGACAACTCGTGATGAAGAATTGCAGGCCAGATTACTTGCAGATTCAGACAGCTTTTTCATTACATGCCAAGGACTTTCTCTTCATTACAAGCTCAGCTTACCTGGTTCACCACCTCCACATACTTTGTCATCAATATCTTGTGTTGAATCAAATTCTAGTTACAGCATTTCATCAGTGGCTGGAGGGTTGGAGAAGTTGGATGGACATCGGGTAGATATATCTCCGAAGATAGAGCCGCATCTATACAGGAGCTATAGCAATCATATCAATGGATCATCTCTATATGCCCCTTTATTAGATAGTAATGCAACTTCTGTTTTTTCTGAAGATATCCCTATTTTTCATCTAGATGGTATTTCTGAAGAAAATGGAAATAGCAAATTGGATTCTTTACCCCTGGAGCAAAATATTGGCCAATTAGGTGTTGTATTCATACATGGGTTTGGTGGAGGAGTTTTCTCCTGGAGGCATGTGATGGGATCTCTAGCTCGGGAGATTAATTGCGCAGTTGCTGCATTTGACCGGCCTGGTTGGGGACTAAGTTCAAGGCCACGTCGGGAGGACTGGGAAGCAAAGGAATTGCCTAATCCTTATAAGCTTGATAGTCAGATTGACATGCTTTTATCATTCTGTTCTGAGATTGGATTTTCGTCAGTGGTGTTAATCGGTCATGATGATGGAGGATTGCTTGCTCTTATGGCTGCACAAAGGGTTCAAACATCAATGAGTTTTCATAATGTTACTATAAAAGGGGTTGTATTGCTAAATGTTAGCTTATCAAGGGAAGTTGTTCCTTCCTTTGCAAGAATCCTCCTGCATACCTCACTTGGAAAAAAGCATATGGTTCGACCTCTACTAAGGATGGAAATCACTCAAGTGGTGAATCGGCGTGCTTGGTATGACGCTACCAAATTGACTACAGAAGTTTTGGATCTCTATAAGGCTCCACTATCTGTTCAAGGATGGGATGAAGCTGTTCACGAGATTGGTAAATTGTCATCTGAAACCATACTGTCAGCAAAAAATGCAGAATCGTTGCTACAAGCTGTTGAAGACATCCCAGTGTTAGTTATTGCAGGTGCTGAAGATTCCCTTGTCTCCTTAAAATCTTGTCAAGCTATGGCCTCAAAACTTGAAAATTCTAGACTGGTTGCAATATCTGGATGTGGCCATTTACCCCATGAAGAGTGTCCAAAGGCATTGCTTGCAGCTATATCACCCTTCATTAGTAGACTCCTGTCTGCATCTGACTCACAAAGCTGA 1956 0.4223 MAKGGQCLFEKVRRCIRTVFFVIALVVSLIVTSLPVVVAVVDILVPFVLISNFTCVKCYSFKQHFHRYSFKSSLMDIPLVSLLRSFIIICVYSICDGPALSHGPYLGTVTLCSFSSIVLLSVKACVFTVNSQIEAEASVASLKRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPESVLSCKSVFSGYPKVPRSPTPSGGRTPKSDSEMRRRPFGTTRDEELQARLLADSDSFFITCQGLSLHYKLSLPGSPPPHTLSSISCVESNSSYSISSVAGGLEKLDGHRVDISPKIEPHLYRSYSNHINGSSLYAPLLDSNATSVFSEDIPIFHLDGISEENGNSKLDSLPLEQNIGQLGVVFIHGFGGGVFSWRHVMGSLAREINCAVAAFDRPGWGLSSRPRREDWEAKELPNPYKLDSQIDMLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMSFHNVTIKGVVLLNVSLSREVVPSFARILLHTSLGKKHMVRPLLRMEITQVVNRRAWYDATKLTTEVLDLYKAPLSVQGWDEAVHEIGKLSSETILSAKNAESLLQAVEDIPVLVIAGAEDSLVSLKSCQAMASKLENSRLVAISGCGHLPHEECPKALLAAISPFISRLLSASDSQS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00238 651 Pfam Alpha/beta hydrolase family 373 634 IPR000073 -
Tsu06g00238 651 PRINTS Epoxide hydrolase signature 452 465 IPR000639 GO:0003824
Tsu06g00238 651 PRINTS Epoxide hydrolase signature 617 639 IPR000639 GO:0003824
Tsu06g00238 651 PRINTS Epoxide hydrolase signature 584 600 IPR000639 GO:0003824
Tsu06g00238 651 PRINTS Epoxide hydrolase signature 377 395 IPR000639 GO:0003824
Tsu06g00238 651 PANTHER HYDROLASE 3 646 - -
Tsu06g00238 651 SUPERFAMILY alpha/beta-Hydrolases 373 642 IPR029058 -
Tsu06g00238 651 MobiDBLite consensus disorder prediction 206 233 - -
Tsu06g00238 651 Gene3D alpha/beta hydrolase 365 644 IPR029058 -
Tsu06g00238 651 PANTHER ALPHA/BETA FOLD HYDROLASE 3 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00238 Tsu-Chr6 1956647 1961689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00238 5 648 Miscellaneous Gene Families AT1G80280 64.939 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00238 - - gmx:100817742 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00238 06 1956647 1961689 Tsu06g00238 06 1956647 1961689 ECH
Tsu02g05515 02 63481825 63486828 Tsu06g00238 06 1956647 1961689 PCT