Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05515 ATGGCGAGAGGAGGACATTGCTTCGAGAAGCTTCGGAGGTGTATTCGGACGGTTTTTTTCGTAGCGGCATTGGTTGCGTCGCTTTTAGTGACGTCGTTGCCGGTTGTTGTGGCGTTTATTGATGTGATTGTGCCTTGTGTTTTGATTTCGAGGTTCACTTGCGTCAGTTGTTACGGTTTCAAAGAGCATTTGAGTCGTTACTCTTTTAAGAATTCGTTGACGGATATTCCTCTTGTTTCAATTATAAGATCCTTCATCATCATCTGTGTTTATTCAATTTGTGACGGTCCTGCTCTCTCACATGGTCCTTACCTTGGAACAGTGGCTCTGTGTTCCTTTGTTTCAATTGCTGTCCTTTCGGTCAAAGCTTGTGTTTTCACTGTTAATTCTCAGATTGAAGGGGAAGCTTCAGTTTCCCTTGCGAGGAAGATACTTCATTTGAAAAAGTCGTGGGGAATGCCTGTCTTATTTCTCTCATCAGTTGTGTTTGCCCTCGGCCATATCGTGGTTGCTTATAGAACCAGCTGCAGAGCAAGGAGAAAGCTCCTGTTTCATCGAGTTGACCCTGAAGCGGTCCTTTCATGCAAAAGTGTTTTCTCGAGCTATCAGAAAGCCCCACGCTCCCCTGTTCCTTCTGGGGGGCGAACCCCAAAAAGTGACACTGAAATGAAGCGGAGACCCTTTGGAGCAGCTCGTGATGAAGAAGTGCCAGTTAGATTACTTGCAGACTCTGACAGCTTATTCATCACCTGCCAAGGTCTTACTCTCCATTACAAACTAAGCCTGCCTGGGTCACGTCCTTCACTTAGCTTGTCCTCATCATCCTTCGCTGAATCTAGTTCTGTTTGCTACACTTCATCAATGTCTGGGGGACTATCAAAATTTAATAGACAACTGCCATATGTGTCTTCGAAAATCCAGCGACAACTCTACAGGACATATAGCAATCAATTCCATGACTCCTCTCCTTTATATGCTCCTCTTTTAGATGGTCCAGTAACGTCTCCCTTTCCTTCCGAAGATATCCCTGTTTTTCAtctagatgaaatttgtgaagaTGATGAAACAGTTAAATCGAATATCCTGTCTTTGGATCAAAAAGTAGAGGGCACTGGCCAAGTGGGCATTGTTTTAATACATGGGTTTGGTGGAGGAGTGTTTTCTTGGCGGCACGTAATGAATTCTCTCGCTCGGCAGAGTAACTGCACAGTTGCTGCATTTGATAGACCTGGTTGGGGATTGACTTCAAGGTTGCGACGGGAGGACTGGGAGAAAACAGAACTGCCTAATCCTTATAAACTTGAAAGTCAGgTTGACCTACTTTTGTCTTTCTGTTCGGAGATTGGATTTTCTTCAGTTGTGCTAATTGGTCATGATGATGGAGGGTTGCTTGCTTTGATGGCTGCACAAAGAGTTCAAAGGTCAATGAATTCTTTCAACGTAACAGTGAAAGGGGTTGTATTGGTAAATGTTAGCTTGTCTCGGGAAGTAGTTCCTTCCTTTGCCAGAATCCTGCTGCACACCTCACTTGGAAAGAAGCATTTGGTTCGGCCGTTACTAAGAACAGAAATCACTCAAGTGATCAATCGGCGTTCATGGTATGATGCTACCAAACTGACACAGGAAGTTTTGAGTCTCTATAAGGCTCCACTATATGTAGAAGGATGGGATGAAGCAGTTCATGAAATTGGTAAATTGTCATCTGAAAACATCCTTTCCGCAAAAAATGCAGAATCATTGCTACAGGATGTAAAAGAGATTTCGTTGTTGGTTGTAGCCGGTGTTGAAGATTCACTAGTTTCTCTGAAGTCTAGTCAAGTGATGGCATCAAAATTTGTGAATTCTAGACTGGTTGCAATCTCAGGATGTGGCCATCTACCTCATGAAGAATGTCCAAAAGCATTGCTAGAAGCAATATTACCCTTCATCGGTAAACTATGTTCTGTATATAACTCGCAAAGTCAGTAG 1968 0.4299 MARGGHCFEKLRRCIRTVFFVAALVASLLVTSLPVVVAFIDVIVPCVLISRFTCVSCYGFKEHLSRYSFKNSLTDIPLVSIIRSFIIICVYSICDGPALSHGPYLGTVALCSFVSIAVLSVKACVFTVNSQIEGEASVSLARKILHLKKSWGMPVLFLSSVVFALGHIVVAYRTSCRARRKLLFHRVDPEAVLSCKSVFSSYQKAPRSPVPSGGRTPKSDTEMKRRPFGAARDEEVPVRLLADSDSLFITCQGLTLHYKLSLPGSRPSLSLSSSSFAESSSVCYTSSMSGGLSKFNRQLPYVSSKIQRQLYRTYSNQFHDSSPLYAPLLDGPVTSPFPSEDIPVFHLDEICEDDETVKSNILSLDQKVEGTGQVGIVLIHGFGGGVFSWRHVMNSLARQSNCTVAAFDRPGWGLTSRLRREDWEKTELPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQRSMNSFNVTVKGVVLVNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVINRRSWYDATKLTQEVLSLYKAPLYVEGWDEAVHEIGKLSSENILSAKNAESLLQDVKEISLLVVAGVEDSLVSLKSSQVMASKFVNSRLVAISGCGHLPHEECPKALLEAILPFIGKLCSVYNSQSQ 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05515 655 Gene3D alpha/beta hydrolase 353 643 IPR029058 -
Tsu02g05515 655 PANTHER HYDROLASE 5 653 - -
Tsu02g05515 655 Pfam Alpha/beta hydrolase family 376 637 IPR000073 -
Tsu02g05515 655 PRINTS Epoxide hydrolase signature 380 398 IPR000639 GO:0003824
Tsu02g05515 655 PRINTS Epoxide hydrolase signature 455 468 IPR000639 GO:0003824
Tsu02g05515 655 PRINTS Epoxide hydrolase signature 620 642 IPR000639 GO:0003824
Tsu02g05515 655 MobiDBLite consensus disorder prediction 203 228 - -
Tsu02g05515 655 PANTHER ALPHA/BETA FOLD HYDROLASE 5 653 - -
Tsu02g05515 655 SUPERFAMILY alpha/beta-Hydrolases 367 645 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05515 Tsu-Chr2 63481825 63486828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05515 1 646 Miscellaneous Gene Families AT1G80280 64.516 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05515 - - gmx:100775895 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05515 02 63481825 63486828 Tsu02g05515 02 63481825 63486828 ECH
Tsu02g05515 02 63481825 63486828 Tsu06g00238 06 1956647 1961689 PCT