Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00196 ATGAATATGCAAGAATTAATTGTTCAAGATGAGTATGTATACAAAGAAGAAACCCTTCTCACAGTTCTAAAAACTTCTCGGTTTTTCAGTGGTGATGGTTTTGTTGTGTATGATTGTAAGGGACAACTCGTTTTCCGATTCGACTCATATGGACCTAACACTCGTGATAAGGAAGAACTTGTTCTTATGAATACAAATGGTCGTTCTCTTCTCACCTTGCGCAAAAAGAAACCAAGTCTTCATCAAAGATGGGAAGGGTTCAAAGGAGAGAGAAAAGACGGTGATAAACCAATCTTCAATGTAAGAAGATCATCGATAATCGCACGGTCAAGAACAACCGTAGCAGTGGAGGTACACGATAACCCAAATATGGAGTACCTCATCGAAGGATGTTTCCCACAAAGATGCTGTAAGATTTTTAACGCCACAAAGAAATTAGTGGCTGAGATTCGTCGTAAGGTGGACCCCACCACTAGTGTCATGCTTGGAAAAGAAGTGTTCATGCTTTGTGTTCAACCTGATTTTGATGTGTCATTTGCCATGGGATTAGTCTTAGTACTTGATCAGATCAATGGTGAGAATTTCTTTGATAATGGGACCACTGAGACCTCGGTGCACCCTACTACAGAGGATTGA 636 0.4041 MNMQELIVQDEYVYKEETLLTVLKTSRFFSGDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNTNGRSLLTLRKKKPSLHQRWEGFKGERKDGDKPIFNVRRSSIIARSRTTVAVEVHDNPNMEYLIEGCFPQRCCKIFNATKKLVAEIRRKVDPTTSVMLGKEVFMLCVQPDFDVSFAMGLVLVLDQINGENFFDNGTTETSVHPTTED 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00196 211 Pfam LURP-one-related 7 186 IPR007612 -
Tsu06g00196 211 PANTHER - 8 201 IPR007612 -
Tsu06g00196 211 SUPERFAMILY Tubby C-terminal domain-like 6 191 IPR025659 -
Tsu06g00196 211 Gene3D - 5 194 IPR038595 -
Tsu06g00196 211 PANTHER LURP-ONE-LIKE PROTEIN 8 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00196 Tsu-Chr6 1646355 1649222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00196 - - gmx:100789078 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00196 06 1646355 1649222 Tsu06g00196 06 1646355 1649222 ECH
Tsu02g05563 02 63900015 63902740 Tsu06g00196 06 1646355 1649222 PCT