Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05563 ATGACACTTTGTATGGATTCTAATTCTAACTCCGTCGCAGAAAAGATGAAAGAGGGGATAGTTGTTCAAGATGGTAATTATGTTTTCAAAGAAGAGATTCATTACACAGTGCTTAAAACCTCTCTATTCTTCTCCGGTGACGGTTTCACCGTCTATGATTGTCATGGTCAAGTCGTCTTCCGAGTTGACTCATATGGACCCGATTCTCGTGGTGTAGATGAACTTGTTCTCATGAATCCCGAAGGCCGTTGCCTCCTCACCGTTCGTCGGAAGAGGCCGAGTTTGCATCAAAGGTGGGAAGGCTTTAAAGGAGAAAGAATAGACGGTGATAAACCGACCTTCAGCGTGAAAAGATCAATGATGATTGGACGACAACGTGCAGGTGTGACAGTAGAGGTGTATGATGACCAAGGTGAGGAATACCAAATCGAAGGGTGCTTCTCTCAACGTTCTTGCACGGTTTTTAACGCGATGAAGGAAACAATGGCTGAGATTTATCGCAAAGTGGACCCTACCACAGGTAATTTGCTTGGGAAGGAAGTTTTCTCTATTTGCGTTAAGCCTGGTTTTGACGCTGCTTTTGCAATGGCATTTGTGCTCGTACTTGATCATATCAGCGGTGATGATTCCCTTGATGATGGTGCAAATGCAGACCCTACGGTACACCCTACTACAGAAGATTACGAAGataaataa 696 0.4411 MTLCMDSNSNSVAEKMKEGIVVQDGNYVFKEEIHYTVLKTSLFFSGDGFTVYDCHGQVVFRVDSYGPDSRGVDELVLMNPEGRCLLTVRRKRPSLHQRWEGFKGERIDGDKPTFSVKRSMMIGRQRAGVTVEVYDDQGEEYQIEGCFSQRSCTVFNAMKETMAEIYRKVDPTTGNLLGKEVFSICVKPGFDAAFAMAFVLVLDHISGDDSLDDGANADPTVHPTTEDYEDK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05563 231 Pfam LURP-one-related 22 201 IPR007612 -
Tsu02g05563 231 Gene3D - 19 211 IPR038595 -
Tsu02g05563 231 PANTHER - 23 216 IPR007612 -
Tsu02g05563 231 SUPERFAMILY Tubby C-terminal domain-like 21 205 IPR025659 -
Tsu02g05563 231 MobiDBLite consensus disorder prediction 212 231 - -
Tsu02g05563 231 PANTHER LURP-ONE-LIKE PROTEIN 23 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05563 Tsu-Chr2 63900015 63902740 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05563 - - mtr:MTR_2g103850 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05563 02 63900015 63902740 Tsu02g05563 02 63900015 63902740 ECH
Tsu02g05563 02 63900015 63902740 Tsu06g00196 06 1646355 1649222 PCT