Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00195 ATGAACCGCCTCCTCTCATTCCTCTTCCATCAgGGAGTGTTGGATGAGCAATTCTTACAGCTCCAGCAGCTACAGGATGAAACCTCACCAAACTTTGTCTCTGAGGTTGTCAACATATATTTCCACGAATCCGAGAAGCTTCTAAGGAATCTAAGAACATTGCTGATGGAGAGGGAATTAATGGACTATAAGAAAATGGGGATAGATTTGAATCAGTTAATGGGAAGTAGTTCAAGCATTGGTGCAAAGAGAGTGAGTAATGTTTGTGTTGCCTTTCGTGTTGCTACTGAACAGAACAACCGTGCCGGATGCTTCAGAGCATTGGAAATGCTGGAACATGAATACTGCTATCTCAAAAACAAATTGCACGAACTATTCCAAATTGAAGAGCAACGTGCTTTGGCAGCTGGAGTGAGGGAATAG 423 0.4255 MNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRTLLMERELMDYKKMGIDLNQLMGSSSSIGAKRVSNVCVAFRVATEQNNRAGCFRALEMLEHEYCYLKNKLHELFQIEEQRALAAGVRE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00195 140 Pfam Hpt domain 35 97 IPR008207 GO:0000160
Tsu06g00195 140 Gene3D HPT domain 1 139 IPR036641 GO:0000160
Tsu06g00195 140 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 29 125 IPR008207 GO:0000160
Tsu06g00195 140 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 138 - -
Tsu06g00195 140 PANTHER - 1 138 IPR045871 GO:0000160|GO:0009927|GO:0043424
Tsu06g00195 140 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00195 Tsu-Chr6 1628995 1631169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00195 K14490 - gmx:100789608 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00195 06 1628995 1631169 Tsu06g00195 06 1628995 1631169 ECH
Tsu02g05564 02 63913998 63915079 Tsu06g00195 06 1628995 1631169 PCT