Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05564 ATGCTTGGTTTCGGCGCGGACCTCTTGTGGGCCGACATGAATCGCCTCCTCGCCTTCCTCTTCCACCAAGGTGTCTTGGATGAACAATTTTTGCAACTTCAACAACTTCAAGATCACACTTCACCTAACTTCGTATCCGAAGTCGTCAACATTTACTTCCACGAATCCGAAAAACTACTCAACAATCTCAGATCATTactAATGGAGAGGGAGTTTTCGgattataagaaaattgaaatacaTTTGAATCAGTTCATTGGTAGCAGCTCAAGCATTGGTGCTAAGAGAGTCACAAGTGTTTGTATTGCTTTTCGTGCAGCTTCTGAGCAAGACAACCGTGCTGGATGTTTGCGAGCGTTGGAGATGTTGGAGCATGAATATTGCTATCTTAAGAACAAATTGCATGAACTATTCCAAATAGAGCAGCAACGTGCTTTGGCAGCAGGAGTGAGATACCCTATGCAGCATCAATAA 474 0.4198 MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDHTSPNFVSEVVNIYFHESEKLLNNLRSLLMEREFSDYKKIEIHLNQFIGSSSSIGAKRVTSVCIAFRAASEQDNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPMQHQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05564 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Tsu02g05564 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Tsu02g05564 157 Pfam Hpt domain 47 117 IPR008207 GO:0000160
Tsu02g05564 157 Gene3D HPT domain 5 156 IPR036641 GO:0000160
Tsu02g05564 157 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Tsu02g05564 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05564 Tsu-Chr2 63913998 63915079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05564 K14490 - gmx:100777831 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05564 02 63913998 63915079 Tsu02g05564 02 63913998 63915079 ECH
Tsu02g05564 02 63913998 63915079 Tsu06g00195 06 1628995 1631169 PCT