Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00190 ATGTCTGCTGCTGTGTGCGGAAGCAAAAGATCTTTCTTTGAAGAACTTCCTCCTTCTCCGCCACTTTCTAAGAGGCTTCGTTGTTCATCTGCTACTTCTCCGATTCGTTTTCCGACTCCATCTCTTATTGATCAGCTCAGAAACCTCTTCCCTCACATGGACCAATTGGTTCTTGAGAGAGCTCTCCAAGAATGTGACAATGACCTAGATGCTGCCATCAAGAGCCTGAATGAGCTTTACTTGGGAGCTGCTGGTGGAAATTTTGGAACTGCTGAAGAATCGGAAATTGCTGTTAATGTGGATGCAGGTAAATTGCAAAATGATGGCAATGCTTCTGCTTCTGAGAACCAGTCTACTTTGAACAGCCTTCCTGCAGATGGAGCAGAATGGATTGACTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAATCAATCAATGAGCGGGCAAGTGCTGAGAAAACAGATGTTCTTGAGAAGGAAAATTCAATGCTGAAGGGGCAAATCGAGGTGCTGAGTAAGGAgagaaattcattcaaaaatgcaTTTAGGATCCAACACGAACGTCTTGCTGACTATGAGAATAAGAATCAAGAATTGCAGCATTTGAAGCAGTTGGCCTCTCAATACCAGGAGCAGATCAGAACACTTGAGATCAACAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGGGCAACGGATTTCAAGGGCATTTCCCACCTGATATCTTCTAA 789 0.4322 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSATSPIRFPTPSLIDQLRNLFPHMDQLVLERALQECDNDLDAAIKSLNELYLGAAGGNFGTAEESEIAVNVDAGKLQNDGNASASENQSTLNSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSINERASAEKTDVLEKENSMLKGQIEVLSKERNSFKNAFRIQHERLADYENKNQELQHLKQLASQYQEQIRTLEINNYALAMHLKQAQQGNGFQGHFPPDIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00190 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Tsu06g00190 262 Coils Coil 144 164 - -
Tsu06g00190 262 Coils Coil 209 236 - -
Tsu06g00190 262 Gene3D - 38 81 - -
Tsu06g00190 262 CDD CUE 41 76 - -
Tsu06g00190 262 Pfam CUE domain 40 78 IPR003892 GO:0043130
Tsu06g00190 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Tsu06g00190 262 SUPERFAMILY UBA-like 40 83 IPR009060 GO:0005515
Tsu06g00190 262 Coils Coil 171 191 - -
Tsu06g00190 262 ProSiteProfiles CUE domain profile. 38 81 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00190 Tsu-Chr6 1591384 1597145 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00190 - - gmx:100813137 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00190 06 1591384 1597145 Tsu06g00190 06 1591384 1597145 ECH
Tsu02g05569 02 63956747 63959217 Tsu06g00190 06 1591384 1597145 PCT