Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05569 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCACCATCACCACCTGTTTCTAAGAGGCTTCGTTGTTCTTCTTCTCCAATTCGtctttctcttccttctctTATCGATCATCTTCAATCTCTTTTTCCACATATGGAAGATCATatcaTTGAAAGAGCGTTGCAGGAATGTGGTAATGATTTAGATGCTGCTATTAAGAGTTTGCACGGGCTTTGTTTAGGATCTGCTGATGAAAATTCTGTAATTGTTCCCAATTCGGATGCTGCTGCTGCTGTCGAAACAGGTGTATTTGAAGGTAATGGGGATGCTTCTGCTTCTGGGAACCAGGCAGCTGAAAACAATCTTCCTGCTGATGGACCTGAATGGATTGACTTGTTTGTTAGGGAAATGTCGTGTGCTACTAGTGTTGATGATGCAAGAGCTCGTGCTGCTAAATTGCTTGAGGTTTTGGAGAAATCGATCAGCTCAAATGTGAGTTCTGGGGCAATGAGTGATCTTCAAAGGGAAAATTTGATGTTGAAATATCAAGTTGAAGTCTTGACCAAGGAGAGAAATTGTTTCAAAAGTGCTTTTAGAATCCAGCTTGAACGGCTTTCTGATTATGAGGATAAAGACCGAGAGTTGCAGCAGTTGAAACAGTTGGTGTCTCAATACCAGGAACAGATCAGAACTCTTGAGGTTAACAACTATGCTTTGAGAATGCATCTGAATCAGGCACAGAAATACAATCCTTTTCCTGGGGGTTTCCCTCCTGATGCCTTCTAA 783 0.4125 MSAAVCGSKRSFFEDLPPSPPVSKRLRCSSSPIRLSLPSLIDHLQSLFPHMEDHIIERALQECGNDLDAAIKSLHGLCLGSADENSVIVPNSDAAAAVETGVFEGNGDASASGNQAAENNLPADGPEWIDLFVREMSCATSVDDARARAAKLLEVLEKSISSNVSSGAMSDLQRENLMLKYQVEVLTKERNCFKSAFRIQLERLSDYEDKDRELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQKYNPFPGGFPPDAF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05569 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Tsu02g05569 260 SUPERFAMILY UBA-like 37 81 IPR009060 GO:0005515
Tsu02g05569 260 Coils Coil 207 234 - -
Tsu02g05569 260 CDD CUE 39 74 - -
Tsu02g05569 260 Pfam CUE domain 39 73 IPR003892 GO:0043130
Tsu02g05569 260 Gene3D - 38 79 - -
Tsu02g05569 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Tsu02g05569 260 Coils Coil 169 189 - -
Tsu02g05569 260 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05569 Tsu-Chr2 63956747 63959217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05569 - - gmx:100815998 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05569 02 63956747 63959217 Tsu02g05569 02 63956747 63959217 ECH
Tsu02g05569 02 63956747 63959217 Tsu06g00190 06 1591384 1597145 PCT