Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00171 ATGGATTCCAATAATTGGGGACCTAATCAGAGTACTGAACCCCCTGGTGAAACACCTGATTGGAGAATTCAACTGCAATCTGATTCACGCCTAAGAATTGTCAACAAAATAATGGACACACTAAGAAAACATCTTCCTGTTTCTGGTCCTGAAGGATTACATGAACTTAGGCAGATTGCTCAAAGGTTTGAAGATAAGATTTATTCTGCTGCAACAAGCCAGTCTGATTATCTACGGAAGATATCCATGAAAATGCTTACAATGGAGAATAAATCTCAAAACACCACTGCCAACAATATGCAATCAAATGAAGGTGGTCCTAGCAATAATCCACCCGATCAAGGGCTCAATTTACAGTCTCAAGTACTTAATCAAGGGCAGCAACATCCTAATCCCTTGCCTAGTCAGCAGCAGCCTCGTCAGCAGCTTCTATCTCAGACCATTCAAAATAATGGTGCACCTCAACCTAACTTTCCATCGGTGTCGAATCTATCCCAGATCCCCAACCAGAATATTGGCCAAAATTCCAACACACATCAACCTGGTCAAAATTCTGCGAGTAATGCTATTGGCCAGAATTCCAATTTACAGGGTATGTTTTCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGCAGGTTGTTCCCCAACAGCAACAGCAGCTACCGCAGAATCCACAACAGATTCTTTACCAACAGCAGCTTCTTAAGCGCAAGTTCACACTGACGCAGATgcaacagcagcaacaacaacagcagcagaACCTTCTGCAACCAAATCAGTTGCAATCTTCTCAGCAATCTGTTATGCAAACGTCATCGGCTATGCAACCTTCTTCTATGATGCAAACATCTCTATCTTCTAGCCTTCCACAGAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCCAGGCTTCAGCAACATTCCCAAATTATCAGGCAGCAACAGAATTCTATTGCTCATCAGCAACAGACACCAATGACTCAACAGCCAAATTTGCCTGtacaacaacagcagcagctTGTAGGGCCTCAGTCAAACACAACGAATGGGCAACATGCTCAGATGCTTGGGCCACAGAGCAATGTCGATGACACACAGAAACCCCAGAGGTTACATCCACAACAGAATAATGTCATGAACCTGCAGCAGCGACAGCAACAGTTAATACATCAACAGTCAGGAAATAATTTACCAGGGTTACAACAGCAACAACTGTTTGGAAACGAGTCTGGCAACCAAGGCATCCAAACAAGCAATCATTCTGCACACATGCTGCAACAACCAAAGGTTTCAATGCAGCAACAATTGCAACAAAATGCATTGAAATTGTTGCCATCTCAGTCACAGCAGTCCCAGACACAGGCTTCACAGCAGCAATTAATGTCGCAGATTCACAATCAGCCTACACAGATGCAGCAGCAGCCAAATCCCCTGCAACGAGATATGCAGCAAAAACTCCAAGCATCAGGGTCCTTACTTCAACAGCAAAGTGTTCTTgatcaacaaaaacaattatatCAATCTCAAAGAACTCTTCCAGAAACATCAACAACTTCTGTGGATTCTACCATTCAGACTGCACAACCAAGTGGAGTTGATGGGCAAGAAGAAGCTTACCAAAAGCTGCAAACCATGAAAGAAAATTACTTGCCAGATATCACTGAAATATATCATGCAGTTTCTCAAAAAATTCAGCAGCACGACTCTAATCCTCAACAGCCAAAGTCAGATCAGATTGAAAAGTTGAGGCATTATAAAACTATTTCGAAACGCATAATAGGAATCCTAGAGCTTACCAAGCAAAGCATTATGCCAGGTTTGAAGGAAAAATTGGGATCATATGAAAAGCAGATAGTAGGTACCATAAATTCATTTAGGCAGAGGAGAGTCATCTCTTCACTGCAACCAGGACAGCTTCCCCCAACTCATGTGCCTTCGATGCCACAGTCACAATCCCAAGTTACTCCAGTACAGTCTCGTGAAAATCAAATGAACTCTCAGATGCAGCCATCAAATTTACAAGGTTCTGCAGGAACGATACAGCAGAACAATGTTGCGAGCTTGCAGCACAATTCTATGTCTGGTTTAGCAACAACACAACAAAATATGTTGAATACAATTCAAACAAGTAATAATTTAGATTCTGGACAAGGAAATTCTTTGAACTCTCTGCAACAGGTTCCAATGAGCTCCCTTCAACAAAACACTGTTAGTACTCCTCAACAGACCAATATCAATTCATTACGGTCACAAGGTGGAGTAAATGTGATCCAACCAAATCTAAATACCCACCAGTCAGGTTCCACTATGTTTCAGCACCAGCAGGAACAGAAGATGCTGCAGAATCATCAGTTCAAACAATATCAGCAACGACAATTGATGCAGaggcagcagcagcagcagctaCATCAGCCTGCAAAACAACAGCTGTCTGGACAACAAATGCCCCAGATTAACCAAATGAATGATATAAATGATATGAAAATGCGACAAGGAATGGGTGTTAAGCCAGGGGTATTTCAGCCACATCATAGCTCAGGTCAAAACTCAGCCTATTCCCATCAACAGGCGAAACAAGGGAGTCCATTTCAGGTTTCTTCACCCCAACTCTTTCAGGCTGCGTCTCCTCAAATTCCACAACATTCATCTCCCCAAGTTGAACAACAAACTCATCTCCAGTCTCTAACAAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCTTTTGGGGTCCCTACTCCTTCACCTCCCATGGCTCCATCTCCTATGCCAGGAGACTCTGAGAAGCCCATTCCTGGCGTTTCACCATCAAATGCTGCCAATGTTGGACAACATACAGGGGGTGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGCATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGCATATTGTAATGCTTTAGCAGTTACTTCTGGAAAGTCAACTGCAGAGCAACCTATTGATCGTCTAATCAGAGCGGTGCAATCAATGTCAACTGAAACATTAACTTCGGCTGTCAATGATCTTAGTCAAGTTGTCAGCATGAGTGATATGATAGCAGGGTCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAGGCTAGAAATTTTATTACTCAAGATGGTACTGGTGGAATCAGGAAGATAAAGCGCTACACCAGTGCTAGACCGTTGAATGTTGTGTCATCTGCTGGAAGCAAGAATGATAGTATCAAGCAGTTATCTGCTTCAGAGGCTTCTCAGCAGGAATCAACTGCAACATCCAATGTCAAGAAGCCAAAGGCTGAGGTTAATCACGCCCTTTTGGAAGAAATACAACAAATTAATCGGCGACTTATCGACACTGTAGTAGACATAAGTGATGAAAATGTTGATTCAACTGCAGCTGCTGTTTCTGCCGCTGAAGTGGCAGAAGGGACCGTTGTCAAATGTTCTTTCATTCCCGTGGCTCTCGGTCCAACTTTAAAATCTCAATATGCTTCACTACAGGCACCTATTCAGCCCCTGCGTTTGCTGATTCCTCCAAATTATCCTAATTGTTCTCCCATATTCCTAGACAAGTTTCCAGTTAAATCCCGTGAGGGGAATGAAGACCTTTCAGAGAAAGCAAAATCAAAGTTTAGCACATCCATGCGTAATTTATCACATCCTATGTCCCTTAAGGATATAGCAAAGACTTGGGATACTTCTGCTCGCGGTGTTATTTCTGAGTATGCACAACAATTTGGTGGAGGAACATTTAGCTCCAAGTATGGAGCTTGGGAGTATGGAACTTGGGAGGATATCTTGGCTGCATAA 3867 0.421 MDSNNWGPNQSTEPPGETPDWRIQLQSDSRLRIVNKIMDTLRKHLPVSGPEGLHELRQIAQRFEDKIYSAATSQSDYLRKISMKMLTMENKSQNTTANNMQSNEGGPSNNPPDQGLNLQSQVLNQGQQHPNPLPSQQQPRQQLLSQTIQNNGAPQPNFPSVSNLSQIPNQNIGQNSNTHQPGQNSASNAIGQNSNLQGMFSGSQRQMPGRQQQVVPQQQQQLPQNPQQILYQQQLLKRKFTLTQMQQQQQQQQQNLLQPNQLQSSQQSVMQTSSAMQPSSMMQTSLSSSLPQNQQSNNVQQSTQSRLQQHSQIIRQQQNSIAHQQQTPMTQQPNLPVQQQQQLVGPQSNTTNGQHAQMLGPQSNVDDTQKPQRLHPQQNNVMNLQQRQQQLIHQQSGNNLPGLQQQQLFGNESGNQGIQTSNHSAHMLQQPKVSMQQQLQQNALKLLPSQSQQSQTQASQQQLMSQIHNQPTQMQQQPNPLQRDMQQKLQASGSLLQQQSVLDQQKQLYQSQRTLPETSTTSVDSTIQTAQPSGVDGQEEAYQKLQTMKENYLPDITEIYHAVSQKIQQHDSNPQQPKSDQIEKLRHYKTISKRIIGILELTKQSIMPGLKEKLGSYEKQIVGTINSFRQRRVISSLQPGQLPPTHVPSMPQSQSQVTPVQSRENQMNSQMQPSNLQGSAGTIQQNNVASLQHNSMSGLATTQQNMLNTIQTSNNLDSGQGNSLNSLQQVPMSSLQQNTVSTPQQTNINSLRSQGGVNVIQPNLNTHQSGSTMFQHQQEQKMLQNHQFKQYQQRQLMQRQQQQQLHQPAKQQLSGQQMPQINQMNDINDMKMRQGMGVKPGVFQPHHSSGQNSAYSHQQAKQGSPFQVSSPQLFQAASPQIPQHSSPQVEQQTHLQSLTKVATPLQSSNSPFGVPTPSPPMAPSPMPGDSEKPIPGVSPSNAANVGQHTGGAAAPAQSLAIGTPGISASPLLAEFSGPDAYCNALAVTSGKSTAEQPIDRLIRAVQSMSTETLTSAVNDLSQVVSMSDMIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTGGIRKIKRYTSARPLNVVSSAGSKNDSIKQLSASEASQQESTATSNVKKPKAEVNHALLEEIQQINRRLIDTVVDISDENVDSTAAAVSAAEVAEGTVVKCSFIPVALGPTLKSQYASLQAPIQPLRLLIPPNYPNCSPIFLDKFPVKSREGNEDLSEKAKSKFSTSMRNLSHPMSLKDIAKTWDTSARGVISEYAQQFGGGTFSSKYGAWEYGTWEDILAA 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 913 932 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 836 867 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 92 118 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 905 939 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 255 373 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 510 536 - -
Tsu06g00171 1288 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 93 IPR036529 GO:0003712|GO:0006355
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 845 867 - -
Tsu06g00171 1288 Gene3D Coactivator CBP, KIX domain 20 99 IPR036529 GO:0003712|GO:0006355
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 876 895 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 775 818 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 1094 1115 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 470 494 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 149 223 - -
Tsu06g00171 1288 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 746 IPR044661 GO:0003713|GO:0031490
Tsu06g00171 1288 Pfam KIX domain 19 98 IPR036546 -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 510 537 - -
Tsu06g00171 1288 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 829 1288 - -
Tsu06g00171 1288 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 746 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 398 420 - -
Tsu06g00171 1288 MobiDBLite consensus disorder prediction 1 21 - -
Tsu06g00171 1288 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 829 1288 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00171 Tsu-Chr6 1405220 1415121 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00171 K14972 - gmx:100805336 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05588 02 64090792 64096922 Tsu06g00171 06 1405220 1415121 PCT