Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05588 ATGGATTCAACAGCACAGACTGGACAGCCAAGTGGGGGTGATTGGCAAGAAGAAGTATATCAAAAAATCAAAGTTATGAAAGAGAGCTACTTGCCAGAGCTTAGTGAGATGTATCAGAAAATCGCAACGAAACTTCAGGAGCATGATTCTCTTCCCCGCCAACCGAAGTCAGATCAGCATGAAAAGCTTAAGGTATTTAAAATGATGTTGGAACGTCTTATATCATTCCTCCAGGTTTCCAAGAGCAACATCTCACCTAGTTTAAAGGAGAAACTGGGTTCATATGAGAAGCAGattataaatttcataaataCAAATAGACCTAGGAAAATGTCTTCATTGCAACCGGGGCAGCTTCCCCCACCTCACATGCACTCAATGTCACAGACGCAGTCCCAAGTTACTCAAGTGCAATCGCATGAAAATCAAACCAATGATCAGTTGCAAACAACAAATATGCAAGGCCCTGGAGCAACAATGCATCAGAATAATATGACGAGCATGCAGCATAGCTCTCTGTCAGGTGTATCGACATCACAGCAATTGATGTCACAGATTCAATCGCAGCCGGAACAATTGCAACAGCAACTGGGTTTGCAACAACAACCAAATCCCTTGCAACGAGATATGCAGCAAAGGCTTCAGGCATCAGGTTCTTTATTTCAACAATCGGGTGTTCTTGATCGACAAAAACAGATATATCAATCACAAAGACCCGTTCCAGAAACTTCGTCAAATGAGATGGCTCCCAAGATGAAGAGGTCGAAGTTGGCCAAGTTGGTATCAGAGGCGGAAAAGACAGTGATAATTCCTTCGATCCTGAAGGATTCGAGGAATGAGAAAACCATCGTTGATGCTATTACCGAAGTCAATGGTTTAAAGCTGCAAGTGAAGGGTCTTGAGTCCAAGGTGGAGAAGTTGAAGACTGACAATGCTTCCTTGCAAGAAGAAGTGGTCAATTTGAAAAAGACCAACAGTGACCTGGAAGTGGCCAATCATGAATATGAGGTGAAGGCTGCTGTTAACTTTGCTGCGGGTTTCGCTGAGGCGATAGCTCAAGTTCAAGTACTAGCTCCTGGGGTAGATGTCTCTGAGGCTCACTACACCAAGGAGATCCGAGATGGCCAACTATTCATAGCCAGCGATGAaggtgatggtgatgatgaagagGATAGCGGTAAGAAACTTGTTGATGTGCAAGATGACCAAATCCATGCAGTTATGAAGAACAGGTTTAAACCTGTATAG 1248 0.4255 MDSTAQTGQPSGGDWQEEVYQKIKVMKESYLPELSEMYQKIATKLQEHDSLPRQPKSDQHEKLKVFKMMLERLISFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPRKMSSLQPGQLPPPHMHSMSQTQSQVTQVQSHENQTNDQLQTTNMQGPGATMHQNNMTSMQHSSLSGVSTSQQLMSQIQSQPEQLQQQLGLQQQPNPLQRDMQQRLQASGSLFQQSGVLDRQKQIYQSQRPVPETSSNEMAPKMKRSKLAKLVSEAEKTVIIPSILKDSRNEKTIVDAITEVNGLKLQVKGLESKVEKLKTDNASLQEEVVNLKKTNSDLEVANHEYEVKAAVNFAAGFAEAIAQVQVLAPGVDVSEAHYTKEIRDGQLFIASDEGDGDDEEDSGKKLVDVQDDQIHAVMKNRFKPV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05588 415 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 179 247 - -
Tsu02g05588 415 MobiDBLite consensus disorder prediction 233 250 - -
Tsu02g05588 415 Gene3D - 287 350 - -
Tsu02g05588 415 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 181 - -
Tsu02g05588 415 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 179 247 IPR044661 GO:0003713|GO:0031490
Tsu02g05588 415 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 181 IPR044661 GO:0003713|GO:0031490
Tsu02g05588 415 Coils Coil 290 331 - -
Tsu02g05588 415 MobiDBLite consensus disorder prediction 233 253 - -
Tsu02g05588 415 MobiDBLite consensus disorder prediction 106 199 - -
Tsu02g05588 415 MobiDBLite consensus disorder prediction 122 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05588 Tsu-Chr2 64090792 64096922 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05588 K14972 - gmx:100783762 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05588 02 64090792 64096922 Tsu06g00171 06 1405220 1415121 PCT