Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04127 ATGGGTTTAGAATCTTCTGATTCATCTGACAGCATCAACAAACCTTTGTTACTAACTCAAATCCAATCTCATCCTATCAAAAGAAcagGGACTGTATGGACAGCAGTTGCACACATAGTGACAGGGGTGATAGGGTCAGGAGTGTTATCTTTGCCATGGAGTATTGCACAACTTGGATGGATTGTAGGACCTTTTTCTATACTGCTTATTGCTTCTTCAACTCTTTTCTCAGCTTTTCTTCTATGCAATACTTATAGATCTCCAAATCCTGAATATGGTCCTCACAGAAGTGCTTCTTATCTTGATgttgtcaattttaatttagGAGTAGGGAATGGAAGACTATGTGGCCTTCTTgtgaatatatgtatatatggtTTTGGAATTGCCTTTGTCATTACAACATCTATCAGCTTAAGAGCAATCCAAAACTCAATTCCTCAACACAACAAAGAGAATGAAGCACCGAGCGAATTTGCAGATGCATATTATATGCTGATTTTTGGAATTGTCCAAATTGTTCTCTCACAGATACCAAACTTACATAACATCAATTGGCTATCCGTTGTCGCTGCGATTACATCGTTTGCTTATTGTTTCATAGGAATGGGACTTTCTATCATGCAAATCATGGAAAATGGATATGCTAAGGGTAGTATTGATGGAATCAGTACCTCTAGTGGAATTCAGAAATTTTGGTTAGTTTCCCAAGCGCTCGGTGACGTGTCGTTCTCCTATCCTTTCTCGACAATTATGATGGAAATACAGGATACTTTGAAGACGCCTCCACCAGAAAACCAAACAATGAAAAAGGCCTCTGTAATATCAgtatctatcacaacattcttTTACCTATGTTGTGGATGTGCTGGATATGCTGCATTTGGCGATAATACACCAGGAAACCTTTTAACAGGATTCGGATCCTCCAAATATTATTGGCTTGTCGACTTTACTCATGTTTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTATACAGCCAACCACTTTTTGGCAATGCCGAGAATTGGTTCCGTATTAAATACTCAGACAGTGAATTTGTGAATCACACATATACCTTGAAACTCCCATTGCTACCAGCTTTTGAACTAAGTTTTCTCAGCCTATCATTCAGAACTGCTTATGTTGTATCAACTGTTGTGATTGCAATTATCTTTCCATACTTCAACCAGATTTTGGGAGTTTTAGGCAGCATCAGCTTTTGGCCATTAACCATATATTTTCCGGTGGAAATATACTTGAGTAGGTCTAATACCGATGCGTGGACGGCTAAGTGGATTATGCTTCAAACCTTCAACATTTTTGGACTTGTATTTggattgtttacttttgttggatGCATTAGAGGAATAGTAACTGAAAAAATAGGCTAA 1398 0.3634 MGLESSDSSDSINKPLLLTQIQSHPIKRTGTVWTAVAHIVTGVIGSGVLSLPWSIAQLGWIVGPFSILLIASSTLFSAFLLCNTYRSPNPEYGPHRSASYLDVVNFNLGVGNGRLCGLLVNICIYGFGIAFVITTSISLRAIQNSIPQHNKENEAPSEFADAYYMLIFGIVQIVLSQIPNLHNINWLSVVAAITSFAYCFIGMGLSIMQIMENGYAKGSIDGISTSSGIQKFWLVSQALGDVSFSYPFSTIMMEIQDTLKTPPPENQTMKKASVISVSITTFFYLCCGCAGYAAFGDNTPGNLLTGFGSSKYYWLVDFTHVCIVVHLVGSYQVYSQPLFGNAENWFRIKYSDSEFVNHTYTLKLPLLPAFELSFLSLSFRTAYVVSTVVIAIIFPYFNQILGVLGSISFWPLTIYFPVEIYLSRSNTDAWTAKWIMLQTFNIFGLVFGLFTFVGCIRGIVTEKIG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04127 465 Pfam Transmembrane amino acid transporter protein 28 459 IPR013057 -
Tsu05g04127 465 PANTHER OS05G0424000 PROTEIN-RELATED 6 464 - -
Tsu05g04127 465 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04127 Tsu-Chr5 51977506 51982579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04127 26 462 Organic Solute Cotransporters AT5G09220 44.545 2.90e-142 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04127 K24917 - gmx:100788056 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04127 05 51977506 51982579 Tsu05g04127 05 51977506 51982579 ECH
Tsu03g00993 03 9190851 9196128 Tsu05g04127 05 51977506 51982579 PCT