Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00993 ATGAGTGGAGAATGTGCTGCAGATGGCAGCACCCCATTTTTGCAAACCCAATTTCCAGATTCATATCATGTCAAAAGAACAgGAACAGTATGGACAGCAGTGGCACATATAGTGACAGGAGTGATAGGGTCAGGAGTGTTGTCATTAGCATGGAGCATTGCACAAATTGGATGGATTGCAGGGCCATTGGCAATTCTTGTATTTGCTTCAGTTACTCTTCTCTCTGCTTTTCTTCTTAGTGATACTTATCGTTCTCCTGATCCTGAATTTGGACCTCATAGAAGTTCATCCTATCTTGATGCTGTTAATCTTCATAAAgGAGAAGGAAATGGACGTTTATGTGGTGTTTTTGTAAATATAAGCTTATATGGTTTTGGAATTGCCTACATCATTACAGCATCCATAAGCATAAGAGCAATCCAGAACTCAATCTGTTTGCATGACAAAGGGAGTGAAGAGACGTGTGAATTTAATGATACATATAGCATGCTTGTTTTTGGTGCTATACAAGTTGTTCTCTCACAGATACCCAATTTCCATAACATTGAATGGCTGTCTATTGTGGCAGCAATAATGTCATTTGCTTATGCTTTCATAGGAATGGGACTTGCCGTTTCTAAAGTCAATGAAAATGGACATTTTGAGGGTAGCATTACAGGAGTACCAACTTCCACTGGGACTGATAAAGTATGGCTGGTTGCACAAGCACTTGGTGACATAGCCTTCTCTTATCCATTCTCAGTAATTCTTATAGAAATACAGgACACATTGAAATCGCCTCCGCCGGAAAACGTAACCATGAGGAGGGCCTCAACAATATCAGTGATTGTCACAACATTTTTCTACCTTTGTTGTGGCTGTGCAGGTTATGCAGCATTTGGTAATGATACACCAGGAAATCTTTTAACAGGGTTTGCAGCTTATAAGCTTTATTGGCTTGTTGACTTTGCCAATGCTTGTATAGTTATTCACCTTGTTGGTGCATATCAGGTATATAGCCAGCCACTTTATGCAATTGTTGAGAATTGGCTTCGTTTTAAGTTCCCCGAAAGTGGATTTGTGAATTACTCATATGACTTAAAACTCCCATTGCTGCCAAATTTTCAAATAAGTCCTCTAAGGCTTTGTTTCCGAACTTTATATGTTGCATCGACGACCGTGATTGCATTGCTCTTTCCATACTTCAACCAGATTTTGGGAGTTTTGGCTGGCATAATATTTTATCCATTAACAATATATTTCCCAGTGGAAATGTATATTAGTCAAGGCAACATTGAACCATGGACAAGCAAGTGGATTTGGCTTAGGACTTTTAGCATTGTTGGCTTTGTGGTGGGATTATTCACTCTCATTGGATCCATTCAAGGGATAATTTCTGCAAAACTCGGCTGA 1392 0.393 MSGECAADGSTPFLQTQFPDSYHVKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQIGWIAGPLAILVFASVTLLSAFLLSDTYRSPDPEFGPHRSSSYLDAVNLHKGEGNGRLCGVFVNISLYGFGIAYIITASISIRAIQNSICLHDKGSEETCEFNDTYSMLVFGAIQVVLSQIPNFHNIEWLSIVAAIMSFAYAFIGMGLAVSKVNENGHFEGSITGVPTSTGTDKVWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENVTMRRASTISVIVTTFFYLCCGCAGYAAFGNDTPGNLLTGFAAYKLYWLVDFANACIVIHLVGAYQVYSQPLYAIVENWLRFKFPESGFVNYSYDLKLPLLPNFQISPLRLCFRTLYVASTTVIALLFPYFNQILGVLAGIIFYPLTIYFPVEMYISQGNIEPWTSKWIWLRTFSIVGFVVGLFTLIGSIQGIISAKLG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00993 463 PANTHER OS05G0424000 PROTEIN-RELATED 11 462 - -
Tsu03g00993 463 Pfam Transmembrane amino acid transporter protein 26 458 IPR013057 -
Tsu03g00993 463 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00993 Tsu-Chr3 9190851 9196128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00993 18 458 Organic Solute Cotransporters AT5G09220 48.874 1.00e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00993 K24917 - gmx:100801302 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00993 03 9190851 9196128 Tsu03g00993 03 9190851 9196128 ECH
Tsu03g00993 03 9190851 9196128 Tsu05g04127 05 51977506 51982579 PCT