Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04047 ATGGTAGCTAAAATCAGGCAAAGTGTTAGTGACTCTCATAATTCAACAAAACCAGTGGTTGGAGAGATTGATACTAATTCGCCGATTCAGTCTGTTAAAGATGCGGTTTCGCTCTTTGGCGAAGCTGCTTCCTCTGCTGAAAATCCTACCATTAAGAAGTCAAAATCAAAACCTTATTCTGTTGAGaGTGTTTGGGCAAAGGAGGCAAAACTTCACTTAGCACAGGTAGAGCTGAACAAATTAATGGCTCGGATGAAAAATGCGGAAACTACCAAGGCTCAACTCCTAGCGGAGCtcgaaaaatctaaaacaacTGTTATGGATCTGAAACAAAAACTTAAAGTTATCGCCGAATCTAGAGAGTTAGCAATTCAGGCAACAAAAGCTTTAAAGTGTCAAGTGAAACagcttaaagaaaaaaaacacgGCAATCTTAATGTGACAAATTGTACTTCGAAAGAAGAGTCAGAATCTGCAGTTCAAAGGTATAAATCTATAATTGCAGAACTTGATCTCGCAAAGCAAGAACTAAGGAAGATTCGTCAGGAGTGTAAGGAATCGATGGAAGCGAAAGTTTCTGCCTTCAAGCGAGCAGAAGAAGCTAAAGATGCAACGGCAGCATACACGGAACGAGCTGATGAGCTTTCGAAAGAAATTTTAGCTGTACAAGAATCAATTCAGCAAATGAAGCTTTCATCTGTCGAAGCCAATCAACAGAAAGAAGAGATATTAGTTGAAAAAAATGTTCCGGGCCAATCATATAAAGCCACCCTTGAAgaatcaaaaaagaaattgcTCGCTTTAAAGAAGGATTTTAGTCCCGGACTCGCTGAAAATCTTGAAGTGAAGTTTAATGAGACAATGAACGAAATATCAGCTCTTCAAAACGAtttggaaaataaaaagaaatcagACTTTGAATCGCTGAAAAGTGTAACTTTTGTGCTTGATGATGCTAAGGGATCATTGCAGAAAGTATCAGAAGAGGAAAACTCTCTTAGAAGCATGGTGGAAGCTCTTAGGGTGGAATTGGAGAATGTAAAAAGAGAGCACTCAgtattgaagaaaaaagaatatgaaacTGAATCCATTGTTAGGAATCTGCGTGGCAAGCTTCATAAAAGCGAGTTGGAGCTTGAAGTCTACTTGGCAGAAGAATCTAAAGTTAGAGGTGAATCTATGCAAATGATCGGGATGCTGAACCAGTTGTCTACTGAAACTGAAAATGCACGGCGGGAGGCTGAAGATATGAAGATCGAGGCAATTGAATTGAAAGTGGAAGCTGAAGTCGCCAAACGTGCATTAGAAGATGCAGAAATGAAACTTAATGTAGCATTAGAAGAAGCAGAAGCGGCGAAAGCAGCAGAGGCGAGTATACTTGATCAAATTAGAGACTTGTCTGAAAAAACAAATGCTGATCACGCCTCAACGTCTGAATCTTGTGCTAGAATCACAATTTCGAGGGAGGAATTTGAGTCCTTAAACCGCACGATTGAGGAGTGTGATAAACTAGTGAGCATAAAAGTGGCTGCTGCGACAACACACATTGAAGCTGTGAAGGTTAGTGAAAATGAGGCTCTCAAAAAGTTAGAGATAACTCAGAAGGAGATTGAGGAGATAAAGAAAGCAACAAATGAGGCCTTGAAACAGGCCGAGATGGCTGAAAGAGCACAAACGGCAGTGGAGACTGAGCTTAAAAGATGGCGCGAGAGACGGCACAAGAAAGCAGAAGAAACTGCAGCTCGAGTATTGGCCGAAAAACAAATGCGGTCAtcgtcttcatcatcatcatcacagcGTTACAAGTTTCAACAACAGAATTCAATTCGGAAAAACATGGAGGTGAAAAAGTTGGAAAAAGGGAAGTTTTCGGTTTCAAAGAAAGTTCTATCGCATAATATTGGTGGCATCTTTCACAGGAAAAAGAGCATGCAGGTTGAGAAAGGATTTCCTTCTTACCTTCCAGGTGAGAATCCTTGGTGA 1983 0.3833 MVAKIRQSVSDSHNSTKPVVGEIDTNSPIQSVKDAVSLFGEAASSAENPTIKKSKSKPYSVESVWAKEAKLHLAQVELNKLMARMKNAETTKAQLLAELEKSKTTVMDLKQKLKVIAESRELAIQATKALKCQVKQLKEKKHGNLNVTNCTSKEESESAVQRYKSIIAELDLAKQELRKIRQECKESMEAKVSAFKRAEEAKDATAAYTERADELSKEILAVQESIQQMKLSSVEANQQKEEILVEKNVPGQSYKATLEESKKKLLALKKDFSPGLAENLEVKFNETMNEISALQNDLENKKKSDFESLKSVTFVLDDAKGSLQKVSEEENSLRSMVEALRVELENVKREHSVLKKKEYETESIVRNLRGKLHKSELELEVYLAEESKVRGESMQMIGMLNQLSTETENARREAEDMKIEAIELKVEAEVAKRALEDAEMKLNVALEEAEAAKAAEASILDQIRDLSEKTNADHASTSESCARITISREEFESLNRTIEECDKLVSIKVAAATTHIEAVKVSENEALKKLEITQKEIEEIKKATNEALKQAEMAERAQTAVETELKRWRERRHKKAEETAARVLAEKQMRSSSSSSSSQRYKFQQQNSIRKNMEVKKLEKGKFSVSKKVLSHNIGGIFHRKKSMQVEKGFPSYLPGENPW 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04047 660 Coils Coil 400 455 - -
Tsu05g04047 660 MobiDBLite consensus disorder prediction 584 608 - -
Tsu05g04047 660 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 631 - -
Tsu05g04047 660 Coils Coil 71 112 - -
Tsu05g04047 660 Coils Coil 277 304 - -
Tsu05g04047 660 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 631 - -
Tsu05g04047 660 MobiDBLite consensus disorder prediction 586 608 - -
Tsu05g04047 660 Coils Coil 523 571 - -
Tsu05g04047 660 MobiDBLite consensus disorder prediction 1 24 - -
Tsu05g04047 660 Coils Coil 323 357 - -
Tsu05g04047 660 Coils Coil 163 190 - -
Tsu05g04047 660 Coils Coil 198 232 - -
Tsu05g04047 660 Coils Coil 365 385 - -
Tsu05g04047 660 Coils Coil 120 140 - -
Tsu05g04047 660 MobiDBLite consensus disorder prediction 7 24 - -
Tsu05g04047 660 Pfam Weak chloroplast movement under blue light 22 574 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04047 Tsu-Chr5 51271649 51273984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04047 - - cam:101515730 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04047 05 51271649 51273984 Tsu05g04047 05 51271649 51273984 ECH
Tsu03g01035 03 9579425 9584540 Tsu05g04047 05 51271649 51273984 PCT