Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01035 ATGGTCGCAAAAATTCGGCAGAGTGCTACTGACTCTCCAACGCCGAATCCAAAACCAGAGGTTGGAGAGATTGACACCAGTCCGCCTTTTCAGTCTGTTAAGGATGCTGTGTCTCTATTTGGGGAAGGTGCTTTCTCTGGGGAAAGACCTATCCTTAAGAAGCCAAAAGCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACGCAACTTCATGTAGCCGAAAAAGAGCTGAACAAGTTGAGGGAACAAGTAAAGAACGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGGACTGTCGATGATTTGACACAAAAGCTAAAACTTATCACTGAATCTAGGGAGTTAGCTATCAAGGCAACAGAAGCTGCAAAAACTcaagcaaaacaaaattatggtGACTCGGATGGAGTCAATGGGACCTGGAAAGAAGAGTTAGAAAGTGCAGTTAAAAGGTATGCATCTATCATGACAGAACTTGATGCTGCTAAGCAAGATCTTAGGAAAACTCGTCAGGAATATGATTCATCCTCAGGTGTAAGAGTGTCGGCTGTCAAGCAAACAGAAGAAGCTGAAAATGCAATGAAGGAAAACACGGAAAGAATATCTGAGCTATACAAAGAAATTTTATCTGTAAAAGAGTCGATTGAGCAAGAAAAGCTTGCATCGGTGGAAGCACAGCGACAGCAAGCATTGACGTTATCTGAGAAAGACGCTCTTAGACAATCATACAAAGCTACTCTTGAACAATCCAAAAAGAAATTACTTGCTTTAAAAAAGGAATTCAATCCCGAGCTCACAAAAAATCTTGAGGCGCAGTTGGCCGAGACAATGAGTGAAATTGCGACTCTGCAGTCAGAAATGGAAAACAAAAGGTCGTCCGACTTGGACGCTGTAAAAACCGTAACTTCGGAGCTTGACGGTGCGAAAGAATCACTGAATAAAGTAGTTGATGAAGAAAAATCTCTTAGAACCTTGGTAGAAACTCTGAAGGTGGAACTAGAGAATGTAAAGAAAGAACATGCTgaattgaaggaaaaagagtCTGAAACCGAATCCATAGTTGGGAATCTACATGTCAAACTCCGCAAAAGCAAGACTGAACTTGAAGCCTGCTCTGCCGAAGAATCTAAGGTTAGAGGGGCATCTGAGGAAATGATCTTGACGCTGAGTCAGCTGACATCTGAAACTGAGGAAGCACGGCAGGAAGCAGAAGATATGATGAACAAAACAGCCGAGTTAAAGAAGGAAGCCGAAGCTACCAAGCTTGCATTAGAAGATGCAGAGAAGAAGCTTAAagaagcaatggaagaagcagaagcagcaaaaGCGGCTGAAGCCAGTGCTCTCGAGCAGATTACAGTGCTAACAGAAAGGACAAGTGCTGCGCGTGCATCAACGTCATCGGAATCTGGTGCTGCGATTACAATCTCAACAGAGGAGTTTGAGTCACTAAATCGAAAAGTTGAGGAGTCTGATAAATTAGCAGACATGAAAGTAGATGCAGCCGAAGCACAGGTTGAAGCTGTGAAAGCTAGcgaaaatgaaattttgaaaaaattcgaAGCAACTCAAAAGGAGATTGAGGATATGAAGACTGCAACACAAGAGGCCTTGAAAAAGGCCGAGATGGCCGAAGCAGCAAAGAGAGCAGTAGAGAGCGAGCTTCGAAGGTGGCGCGAGCGTGAACAGAAAAAGGCAGCCGAAGCTGCAGCACGGATACTGGCCGAAACACAGATATCACTGTCATCAGAGTCATCTCCTCAGCATTATAGGATTCAAAAGCAGAATGTCCCTCCTCCTCATACAACAGTGGAAGTGAGGAAGTTTGAAAAGGAGAAGGTCTCGTTTTCGAAGAAAACAGTGTTGCCTAATATTGGTGGTATCTTTCAGAGGAAGAAAAGCAATGTTGATGCTGGATCTGTTTCTTATTTGCCTGGTGAGAATCCTGTATAG 1971 0.4186 MVAKIRQSATDSPTPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGERPILKKPKAYSAERVLAKETQLHVAEKELNKLREQVKNAETTKAQALVELERAQRTVDDLTQKLKLITESRELAIKATEAAKTQAKQNYGDSDGVNGTWKEELESAVKRYASIMTELDAAKQDLRKTRQEYDSSSGVRVSAVKQTEEAENAMKENTERISELYKEILSVKESIEQEKLASVEAQRQQALTLSEKDALRQSYKATLEQSKKKLLALKKEFNPELTKNLEAQLAETMSEIATLQSEMENKRSSDLDAVKTVTSELDGAKESLNKVVDEEKSLRTLVETLKVELENVKKEHAELKEKESETESIVGNLHVKLRKSKTELEACSAEESKVRGASEEMILTLSQLTSETEEARQEAEDMMNKTAELKKEAEATKLALEDAEKKLKEAMEEAEAAKAAEASALEQITVLTERTSAARASTSSESGAAITISTEEFESLNRKVEESDKLADMKVDAAEAQVEAVKASENEILKKFEATQKEIEDMKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAAARILAETQISLSSESSPQHYRIQKQNVPPPHTTVEVRKFEKEKVSFSKKTVLPNIGGIFQRKKSNVDAGSVSYLPGENPV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01035 656 Coils Coil 246 266 - -
Tsu03g01035 656 Coils Coil 325 359 - -
Tsu03g01035 656 Coils Coil 395 457 - -
Tsu03g01035 656 MobiDBLite consensus disorder prediction 1 30 - -
Tsu03g01035 656 Coils Coil 500 520 - -
Tsu03g01035 656 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 631 - -
Tsu03g01035 656 MobiDBLite consensus disorder prediction 587 607 - -
Tsu03g01035 656 Coils Coil 151 178 - -
Tsu03g01035 656 Pfam Weak chloroplast movement under blue light 23 570 IPR008545 -
Tsu03g01035 656 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 631 - -
Tsu03g01035 656 Coils Coil 63 118 - -
Tsu03g01035 656 Coils Coil 193 213 - -
Tsu03g01035 656 Coils Coil 533 567 - -
Tsu03g01035 656 Coils Coil 272 299 - -
Tsu03g01035 656 MobiDBLite consensus disorder prediction 587 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01035 Tsu-Chr3 9579425 9584540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01035 - - gmx:100794569 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01035 03 9579425 9584540 Tsu05g04047 05 51271649 51273984 PCT